Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1889 |
Symbol | |
ID | 8119366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 2156285 |
End bp | 2157664 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644852280 |
Product | type III secretion apparatus H+-transporting two-sector ATPase |
Protein accession | YP_003004218 |
Protein GI | 251789497 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family [TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAC TGGATGTCAT CGACACCCGC TACCCGCAGC TCACCCAATG GCTGCGACGG CAACAGCGCC GGTTGGCGGC GTATTCGCCG GTAACGCGAC AAGGCCAAAT CATCGGCATC AGCGGCATTT TGCTGGAATC CAGCTTGCCG AACGCCCGCA TCGGCGATTT ATGTCTGGTG GAACGCAACG ACAGCTCACA GGTGCTGGCG GAAATCGTCG GTTTCAGCCC CAGCAACACC TTCCTGTCGG CGTTGGGCGC GCTGGACGGC ATCGCGCAGG GGGCGGTCGT CACGCCGTTG TACCAACCGC ATTGCGTGCA GGTTTCCGAT GCACTGTTCG GCAGCGTGCT GGACGGCTTC GGTCGTCCGC TGGAGGAAGG CGGCCACAGT GCGTTTGTCG AGCCGGGCGA TCTGAATGCC AATCCGATGC CGGTGATCGG CGATGCGCCG CCGCCCACTG AACGCCCGCG TATCGCCGAC CCGTTGCCCA CCGGTATGCG CGCCATCGAC GGCCTGCTGA CGATCGGCTG CGGCCAGCGC GTCGGGGTGT TCGCCGGCGC CGGCTGCGGC AAAACCACCC TGCTGGCGGA ACTGGCGCGC AACACCCCAT GCGACGCCAT TGTGTTCGGC TTAATCGGCG AGCGTGGCCG CGAACTGCGC GAATTTCTCG ATCACGAGCT GGACGAACAG CTACGCAGCC GCACCGTGCT GGTCTGCTCC ACCTCCGATC GCAGCAGCAT GGAACGCGCC CGCGCCGCCT TCACGGCAAC CGCCATCGCC GAAGCCTTTC GCGCGGCGGG CAAACAAGTG CTGCTGATTA TCGACTCGCT GACCCGCTTT GCCCGCGCCC AGCGTGAAAT TGGCCTGGCG CTCGGCGAAC CGCAAGGGCG CGGCGGGCTG CCGCCTTCGG TTTACACCCT GCTGCCCCGC CTGGTGGAGC GCGCCGGGCA AACCCGCCAG GGCGCGATCA CCGCCCTGTA TTCGGTGCTG ATCGAACAAG ACTCGATGAA CGACCCGGTC GCCGACGAAG TACGCTCGCT GATCGACGGC CACATCGTGC TGTCGCGTCG GCTGGCTGAA CGCAACCACT ATCCGGCCAT CGATGTGCTG ATGAGCCTGA GCCGTACCAT GAGCAACGTG GTGGAGCGGG AACACACGCG CAACGCCAAT GCCGTACGAC GGCTGATGGC CGCCTACAAA CAGGTGGAAA TGTTGATTCG CCTCGGCGAA TACCAGCCGG GGCACGATGC CCTCACCGAT GCCGCCGTCA GCGCCAACGA CGACATCAAC CGCTTTCTGC AACAAGCGAT GCGCGAGCCG CAGAGTTTTG AGTTTATCCA GTCGCAACTC GCCGAGGTGA GTCAGTATGC CAATCTCTAA
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Protein sequence | MSTLDVIDTR YPQLTQWLRR QQRRLAAYSP VTRQGQIIGI SGILLESSLP NARIGDLCLV ERNDSSQVLA EIVGFSPSNT FLSALGALDG IAQGAVVTPL YQPHCVQVSD ALFGSVLDGF GRPLEEGGHS AFVEPGDLNA NPMPVIGDAP PPTERPRIAD PLPTGMRAID GLLTIGCGQR VGVFAGAGCG KTTLLAELAR NTPCDAIVFG LIGERGRELR EFLDHELDEQ LRSRTVLVCS TSDRSSMERA RAAFTATAIA EAFRAAGKQV LLIIDSLTRF ARAQREIGLA LGEPQGRGGL PPSVYTLLPR LVERAGQTRQ GAITALYSVL IEQDSMNDPV ADEVRSLIDG HIVLSRRLAE RNHYPAIDVL MSLSRTMSNV VEREHTRNAN AVRRLMAAYK QVEMLIRLGE YQPGHDALTD AAVSANDDIN RFLQQAMREP QSFEFIQSQL AEVSQYANL
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