Gene Dd1591_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1827 
Symbol 
ID8117310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand- 
Start bp2088058 
End bp2088711 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content58% 
IMG OID644852219 
Productphage baseplate assembly protein V 
Protein accessionYP_003004157 
Protein GI251789436 
COG category[R] General function prediction only 
COG ID[COG4540] Phage P2 baseplate assembly protein gpV 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0087576 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCCCA CCATGAATAC ATACGAATAT CTCTCCGAAA TCCAGCGCGC ACTGCGTAAC 
CTGATTCGTA TCGGCGTCGT GACCGAAGTC GATACCCAAC AGGCACGCTG CCGCGTGCAA 
ACCGGTGGCA TGGTCACCGG ATGGCTCCAC TGGCTGTCCC GTCGCGCGGG GAGTTCCCGC 
GAATGGTGGG CGCCGTCGGT GGGTGAACAG GTACTCATAC TTGCTATAGG AGGCGAGCTC 
AATACGGCTT TTGTCGTACC GGGTATTTAC AGCGACCACC ACCCTGCGCC ATCAGTGTCG 
GCGGATGCCT GTCACATCCG CTTTCCCGAT GGCGCCGTGA TGGAATATGA ACCGGCTAAC 
GGCGCACTGA CCGTGACCGG CATCAAAACC GCCACTGTCG TCGCAGCGGA ATCTGTGTCC 
GTTACCACGA AAAACGTCAC CATCAACGCC AGCGAACGCA TCACGCTGGA TACACCGGAA 
GTCGTCTGTA CACATAAGTT GATCACCCAG ACTATTGAGG TACAGCAAGG CGGCAGCATC 
ACAGGCAGCG TCACGCATTC AGGAGGAAGC TTCTCCTCTA ACGGCGTGGT GGTGCATACC 
CATCAACACG GCGGCGTACA AAGTGGCGGC GGCACAACAG GAGGACCTTT ATGA
 
Protein sequence
MLPTMNTYEY LSEIQRALRN LIRIGVVTEV DTQQARCRVQ TGGMVTGWLH WLSRRAGSSR 
EWWAPSVGEQ VLILAIGGEL NTAFVVPGIY SDHHPAPSVS ADACHIRFPD GAVMEYEPAN 
GALTVTGIKT ATVVAAESVS VTTKNVTINA SERITLDTPE VVCTHKLITQ TIEVQQGGSI 
TGSVTHSGGS FSSNGVVVHT HQHGGVQSGG GTTGGPL