Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1817 |
Symbol | |
ID | 8117300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 2079099 |
End bp | 2079689 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644852209 |
Product | Tail Collar domain protein |
Protein accession | YP_003004147 |
Protein GI | 251789426 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.386449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAT ACACCCCATC CTGTTCGTTT GAGCTGATAT TCGAAAAAGA GAATTTATAT AAAAATAGTC AGACTCATAA CGACGGTAAT TTACATGGAT GTTGCAGATG TCATGGGGAG CAACAGTATG CTCCTGATAT CTATCCTGCC TCGACCGATG GATTGAAGGA GTTGATCGGT ATTCCACAAC CCTGGCCGTT GGCAGAAGCA CCGGAAGGCT GGCTGAAATG TAATGGCCAG ACATTTGATA CCGCAAAATA TCCGCAACTG GCAAAACTAT ATCCTGCCGG CACGTTACCG GATCTGCGCG GCGAGTTTAT TCGCGGCTGG GACGATGAGC GTGGGGTCGA TACAGACAGA AAACTGCTCT CAGCACAAGC CGGCACCCAT ATTCTTGGTG ACGATGGGGG TTATCCAACG CTGAACAGTA TTGGTAATCT ATCTGAATGC AATGCAGATA AACCCGATGG TAATGTCCGA ACTCTATATT GGTTAGATAC AAACAAATCG GAAAAACTAG CCAGTGAAAA ATTTTGGGGC GCCACTCGCC CGCGCAATAT CGCTTTCAGC TATATCGTTA AGGCAGGTTA A
|
Protein sequence | MKKYTPSCSF ELIFEKENLY KNSQTHNDGN LHGCCRCHGE QQYAPDIYPA STDGLKELIG IPQPWPLAEA PEGWLKCNGQ TFDTAKYPQL AKLYPAGTLP DLRGEFIRGW DDERGVDTDR KLLSAQAGTH ILGDDGGYPT LNSIGNLSEC NADKPDGNVR TLYWLDTNKS EKLASEKFWG ATRPRNIAFS YIVKAG
|
| |