| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1180 |
|---|
| Symbol | |
|---|
| ID | 8118732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1342056 |
|---|
| End bp | 1342784 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644851577 |
|---|
| Product | transcriptional regulator, MerR family |
|---|
| Protein accession | YP_003003526 |
|---|
| Protein GI | 251788805 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTACT CCATCGGCGA ATTTGCCAGA CTCTGCGGTA TTAACGCCAC GACGCTCAGG
GCATGGCAGA GTCGCTACGG CCTGCTGAAA CCGCTGCGTA CCGATGGGGG ACATCGTCTG
TATAGCGACG CGGATGTCCA ACAGGCGTTG AAAATTCTCG ACTGGGTAAA AAAAGGGGTT
CCCGTCAGCC AGATTAAACC GCTGCTGGAA CGCCCAGAGA CGCGACGCAG CAATAACTGG
GCGACATTGC AGGAAACCAT GCTCCAGCGT CTCAGAGAAG GCCGCATTGA ATCGCTGCGC
CAGCTTATCT ACAACACCGG CCGCGAATAC CCCCGGCCGG AAGTCGTCAA TGAGGTGTTA
CGCCCGCTGC GACGCCACGT GTCGGCGAAT ATTCCCGCGA TGATGACGCT GCGGGAGATA
CTCGACGGTC TCATTATTTC CTACACCTCG TTTTGTCTTG AAGGCGACCG GAAAGCGCCT
GGAGACAACT ATCTGATCGG CGGCTGGCAG TTGACCGATC CTTGTGAAAT CTGGCTGGAG
GCGCTGAAAC GCACCGGGCA AGGCCATCGC ATTCATGTGC TGCCGCTTTC CCCTGCCACG
CCTGCGCCGG AAATTTTCCC GGACAGGCAA TGGCTGCTGG TCACCAGTGG GAAACTCACG
GCGGCACGCA AAAAACAAAT CGAAAAGTGG CGCGAGCAGG TTGCCTCGCT GGAAATTATC
TTATTGTAA
|
|---|
| Protein sequence | MPYSIGEFAR LCGINATTLR AWQSRYGLLK PLRTDGGHRL YSDADVQQAL KILDWVKKGV
PVSQIKPLLE RPETRRSNNW ATLQETMLQR LREGRIESLR QLIYNTGREY PRPEVVNEVL
RPLRRHVSAN IPAMMTLREI LDGLIISYTS FCLEGDRKAP GDNYLIGGWQ LTDPCEIWLE
ALKRTGQGHR IHVLPLSPAT PAPEIFPDRQ WLLVTSGKLT AARKKQIEKW REQVASLEII
LL
|
|---|
| |