| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1121 |
|---|
| Symbol | |
|---|
| ID | 8118273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1292117 |
|---|
| End bp | 1293298 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644851523 |
|---|
| Product | outer membrane protein assembly complex subunit YfgL |
|---|
| Protein accession | YP_003003472 |
|---|
| Protein GI | 251788751 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1520] FOG: WD40-like repeat |
|---|
| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTGC GTAAAACACT TTGGGTCGGA CTGGTTTCCA TCACGTTGCT GAGCGGCTGT
TCGCTGTTCG ATCGCGAGGA GGATGTCGTC AAAATGTCTC CTCTGCCGCA GGTAACTAAC
CAGTTTACCC CTACCAAAGT CTGGAGTCGT TCCGTTGGCG GCGGCACGGG GGAGTTTTAC
TCCAACCTAC GCCCGACCTG GCAGGATAGC CGTGTCTATG CGGCTGATCG TCACGGTACG
GTGAAAGCGC TGGATATCAA TAGCGGTGAA GAGAAGTGGC GTGCCGATCT GGCGGAGAAA
ACCGGCCTGC TATCCAGCAA TCGTCCGGCT TTGTTGTCGG GCGGCGTTTC CGTATCGGGT
AACCATGTTT ATGTCGGTAG CGAACGGGCA CAGCTTTTTG CTCTGAACGC TGACGACGGT
TCCTTGCAGT GGCAAACCAA AGTCGCGGGT GAAGTGTTGT CGAGCCCGGC GGTCAGCGAC
GGCGTGGTGA TTATTCACAC CAGTAACGGT ATGTTGCAGG CGCTCAGTGA ATCCGACGGC
ACCATCAAGT GGACCGTAAA CCTGGATATG CCGTCGTTGT CGTTGCGCGG CGAATCGTCG
CCGATAGCGG CGTTTGGGGC GGCGATTGTC GGTGGCGATA ATGGCCGCGT GAGCGCAGTG
ATGATCAATC AGGGGCAGTT GATTTGGCAG CAGCGTATCT CCCAACCGGG CGGTGCGACG
GAAATTGCTC GTCTGAACGA TGTCGACACC ACGCCGGTCG TGGCGGGCAA CGTGGTATAT
GCTCTGGGTT ATAATGGTAA TCTGACGGCG CTGGATCTGC GTTCCGGGCA GATTACCTGG
AAGCGCGAAA TTGGTTCGAT AAACGATTTT ATTGTTGATG GCGATCGTAT TTATCTGGTG
GATCAGGATG ATCGCATCAC TGCGCTGAAC ACCAACGGCG GTGTTGTTAT CTGGCGGCAG
GGCGACCTGT TGCATCGGAA CCTGACGGCA CCGGCGTTGT ACAATGGCTA TCTGGTCGTC
GGCGATGCCG AAGGCTATCT GCATTGGGTG AATACCACCG ACGGTCGTTT TGTGGTTCAG
CAGAAAGTGG ACGGTTCCGG TCTGTTGAGT AAACCGGTGG TTGCCAGCGA TAAACTGTTG
GTGCAAGCCA AAGATGGCGA GGTTTACGCC TTTACTCGTT AA
|
|---|
| Protein sequence | MQLRKTLWVG LVSITLLSGC SLFDREEDVV KMSPLPQVTN QFTPTKVWSR SVGGGTGEFY
SNLRPTWQDS RVYAADRHGT VKALDINSGE EKWRADLAEK TGLLSSNRPA LLSGGVSVSG
NHVYVGSERA QLFALNADDG SLQWQTKVAG EVLSSPAVSD GVVIIHTSNG MLQALSESDG
TIKWTVNLDM PSLSLRGESS PIAAFGAAIV GGDNGRVSAV MINQGQLIWQ QRISQPGGAT
EIARLNDVDT TPVVAGNVVY ALGYNGNLTA LDLRSGQITW KREIGSINDF IVDGDRIYLV
DQDDRITALN TNGGVVIWRQ GDLLHRNLTA PALYNGYLVV GDAEGYLHWV NTTDGRFVVQ
QKVDGSGLLS KPVVASDKLL VQAKDGEVYA FTR
|
|---|
| |