Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1089 |
Symbol | |
ID | 8118241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 1258332 |
End bp | 1259489 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644851491 |
Product | Pectate lyase/Amb allergen |
Protein accession | YP_003003440 |
Protein GI | 251788719 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3866] Pectate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACA CGCGTGTACG TTCTATCGGA ACCAAAAGTT TACTGGCTGC CGTTGTAACA GCAGCACTGA TGGCTACCTC TGCTTATGCG GCAGTAGAAA CTGATGCCGC AACAACTGGC TGGGCAACGC AAAACGGCGG CACTACCGGT GGCGCGAAGG CAGCAAAAGC AGTTGAAGTA AAAAACATTA GCGACTTTAA AAAAGCCCTG AATGGAACCG ACTCATCACC CAAAATCATC AAAGTAACAG GACCGATTGA TATCAGTGGC GGCAAAGCCT ACACCAGTTT CGATGATCAG AAAGCGCGTA GCCAGATCAG TATTCCGTCC AATACCACCA TTATCGGTGT TGGCAGCAAT GGTAAATTCA CCAACGGTTC TCTGGTGATC AAAGGCGTAA GCAACGTTAT CCTGCGTAAC CTGTATATCG AAACGCCGGT AGACGTAGCA CCGCATTATG AAAGTGGGGA TGGCTGGAAC GCCGAGTGGG ATGCAGCCGT TATCGACAAC TCTACCAACG TCTGGGTTGA CCACGTCACC ATCAGCGACG GTAGCTTCAC CGACGACAAA TACACCACCA AAGATGGTGA AAAATACGTT CAGCACGACG GCGCACTGGA TATCAAGAAA GGGTCTGACT ACGTCACTAT TTCTTACAGC CGCTTCGAAC TGCACGACAA AACCATCCTG ATCGGCCACA GCGACAGCAA CGGCTCTCAG GATTCCGGCA AACTGCGCGT CACCTTCCAC AACAACGTGT TCGACCGCGT GACTGAACGT GCCCCGCGCG TACGTTTTGG TAGCATCCAT GCTTACAACA ACGTTTATCT GGGCGACGTG AAACACAGCG TTTATCCGTA CCTGTACAGC TTCGGCCTGG GCACCAGCGG CAGCATCCTG TCTGAGTCCA ACTCCTTCAC GCTCTCCAAC CTGAAGAGCA TTGATGGTAA AAACCCAGAA TGTAGCATCG TGAAGCAATT CAACAGCAAG GTGTTCTCCG ATAAAGGCTC ACTGGTTAAC GGCTCAACCA CCACCAAGCT GGATACCTGT GGTTTGACGG CGTACAAACC GACTCTGCCG TATAAAGACA AGCCTCAAGC CATGACAAGC AGCCTGGCTA CCAGCATCAA CAACAACGCA GGCTACGGCA AACTGTAA
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Protein sequence | MKNTRVRSIG TKSLLAAVVT AALMATSAYA AVETDAATTG WATQNGGTTG GAKAAKAVEV KNISDFKKAL NGTDSSPKII KVTGPIDISG GKAYTSFDDQ KARSQISIPS NTTIIGVGSN GKFTNGSLVI KGVSNVILRN LYIETPVDVA PHYESGDGWN AEWDAAVIDN STNVWVDHVT ISDGSFTDDK YTTKDGEKYV QHDGALDIKK GSDYVTISYS RFELHDKTIL IGHSDSNGSQ DSGKLRVTFH NNVFDRVTER APRVRFGSIH AYNNVYLGDV KHSVYPYLYS FGLGTSGSIL SESNSFTLSN LKSIDGKNPE CSIVKQFNSK VFSDKGSLVN GSTTTKLDTC GLTAYKPTLP YKDKPQAMTS SLATSINNNA GYGKL
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