| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1019 |
|---|
| Symbol | |
|---|
| ID | 8120292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1176496 |
|---|
| End bp | 1177560 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644851416 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003003371 |
|---|
| Protein GI | 251788650 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACCC CGGAGATTCT GGCGATAACT TCGCTCAGTT GTGGTTATCC GCAACGTTCC
GTGCTGGAGA ATGTAAGTTT CTCGGTGCAT GAAGGGGAGA TGGTTTGCCT GTTGGGGGCC
AGCGGCGACG GCAAAACCAC GTTGCTGAAA TCAATAGCGG GTCTATTGCC GCAAGAGCAA
GGTCGAATCG TCATTGCCGG CCAGACGTTG GCGCCTCAAA CACCAGGTGG TGAGATGCCG
TCATACGCGA TAGGCATGGT GTTTCAGGAT GATGCCCTGT TTCCCCACCT GACGGTCATG
GAGAATATTA CCTTCGGGCT ACGCGGCAAG TCATCCGAAG AGATCAGCAC TCTGGCGATG
GACGTCGTGG GGGTGATGCA ACTGGAAACG TTTACCCGTT GTTATCCTCA CGAACTTTCC
CGCGTTCAGT ACCAGCGTGC GGCTATTGCG CGTGCGCTGG CGTGTCAGCC AAAACTGTTG
CTGTTGGATG AGCCGTTTTC TGCCGTTGAT AGCCAAATCC GGTATCAATT GATCAGCGAG
TTGCGCCAAA TTCTGCGGCA TCGTCGAATT GCCACGCTAT TTGCGACTTC TGATCGGGAA
GATGCTTTTG CTTTCGCCGA TCACCTGATT CTGATCCATG AGGGCAGTAT TGTGCAGCAG
GGCTTTTCCG CTGACCTTTA CTACCGGCCG GTCAACCGCT ATGTGGCCAG TTTTATGGGT
AATACCAATT ACCTGCCGGT AAAAATCAAT GGCGACAGGC AATGGCAGAG TTTCCTCGGC
GAGCATCAGG CGACGAGGGC GCTGAAACTG CCGCATGGTG CGCAGTACGA CTGGTTGATT
CGCCCGCAAG AAATTGCGCT GGCGCTGGAT GAAGATGGCC CGGGCATTAT TGAAGATCGG
CTATTTATGG GGAACAGTAA TTTTTATCGT ATCCGGGTCA ATGAGTTGGA AATTCAGGTG
CAAAGCGGCA ACTGGTTCGA GCCGGGGCAA CCGGTCAGGC TCAGTATTCG TATCGATCAA
CCGGTTCTTT TTGCGCCGGA GGCGGCGATA AGCTCACAGG ACTAG
|
|---|
| Protein sequence | METPEILAIT SLSCGYPQRS VLENVSFSVH EGEMVCLLGA SGDGKTTLLK SIAGLLPQEQ
GRIVIAGQTL APQTPGGEMP SYAIGMVFQD DALFPHLTVM ENITFGLRGK SSEEISTLAM
DVVGVMQLET FTRCYPHELS RVQYQRAAIA RALACQPKLL LLDEPFSAVD SQIRYQLISE
LRQILRHRRI ATLFATSDRE DAFAFADHLI LIHEGSIVQQ GFSADLYYRP VNRYVASFMG
NTNYLPVKIN GDRQWQSFLG EHQATRALKL PHGAQYDWLI RPQEIALALD EDGPGIIEDR
LFMGNSNFYR IRVNELEIQV QSGNWFEPGQ PVRLSIRIDQ PVLFAPEAAI SSQD
|
|---|
| |