| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0952 |
|---|
| Symbol | |
|---|
| ID | 8121095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1097761 |
|---|
| End bp | 1099197 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644851339 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003003304 |
|---|
| Protein GI | 251788583 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.728671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACC TCTCCGAGCT TAAGGAACTG CAAGATTTCT TGCACACAGC ATTACTCGAG
CCCGCGAACC CACGGCAACT GGCGATTAGC GGCAGCGACG AAGCATTGAC CTGGCAACAG
CTCTCCGTAG CCGTTACCGA TTGGTCACAG CGCTACCGGC GCTGTCAGCA GCCTGCCGGT
ACTCCGGTAG TTCTATACGG GCATCAGCAG GCGGAATTTG CTGTAGCGAT TTATAGCTGC
CTGCTGCATA ACATTCCCTA CATCCCGGTG GACTGTATCT ATCCGCAGGA ACGGCTCAAC
GAGATTTGCC GGCAGGCGAA AGCGCCTTAC TACTATGATG TGGCGACACG GCAGTTTATG
ACCACCGGCG AGGCGGGGCA GGTGTTGGCC GAGCAGGATC TGGCTTATAT CATGTTCACT
TCCGGCAGTA CCGGAAAGCC CAAAGGCGTG CAGATCGGGC GTGAAAGCCT GTGGCATTTC
ATGAAGTGGG TTCGTCAGGA TTTTGCACTG CCTGAGTTGC CGGTGTTGAT GAATCATGCG
GTATTCAGCT TTGATCTCTC GTTGATTCCG TTACTGGCGA ATCTGGCGAC CGGGGGGCAC
ATTGTCCTGA ATGCGAAAGA GGATATCGCC GCGGAAAACT GGTTGGATCG GCTGAAAAGC
AACGGCGTTT CCGTGTGGGT TTCCACGCCG TCTTTTGCCT ACCAGCGGCT GCTTTCCCCA
CAGTTCAACA GCGACTATTT GCCTGACCTC GGCGTTTTCG TGTTCATCGG TGAAGTATTA
AACAAAGCGC TGGTCAAACA ACTGCGCCGC CGCTTCCCAC ATGCCAAAAT TCTCAACTCG
TACGGCCCGA CGGAAGCGAC CATCGCAACC ACCGTCATCG ACATTACCGA TGAGGTACTG
AACAGTGGGA ACGACCTGCT GCCGGTGGGG GCGATGATGC CGGATTCCAG AATGGAGATC
ACCGCAGAGG GTGAGCTGAT TATCTGGGGT AAAAACGTGA TGCGTGGTTA CCTTGGGCTT
GCGCAGGAGA ACGCGGAGAA GTTGCTGCAC CGTGAGAGCG AGGAATTCCG GGGTTATAAA
ACCGGCGATC TGGGCTACGA GGTTGACGGC ATTCTGTATT GCCAGGGCCG GAATGACAGC
CAGATCAAAC TGAACGGTTA CCGCATTGAA ATCAACGAGA TTGAAAATCG TCTGCTGGCT
ATGCCGGACA TTAGCGAAGC GGTAGTGTTG CCGTTAATGA AATCAGGGGG CGGCGTGTTG
CGTATTGCGG CCTTCTGCGT GACGAAAATG GCCCCAGATG CGATTAAGAC TTCACTTTCG
CAGGTGATCC CGCATTACAT GGTGCCCTCT CAAATTATTA TTAAAGATGC GTTACCGCTG
AATCCTAACG GTAAAATAGA TCGTAAACTG CTGGATACTC ATGCCCGCAC TAATTAA
|
|---|
| Protein sequence | MNYLSELKEL QDFLHTALLE PANPRQLAIS GSDEALTWQQ LSVAVTDWSQ RYRRCQQPAG
TPVVLYGHQQ AEFAVAIYSC LLHNIPYIPV DCIYPQERLN EICRQAKAPY YYDVATRQFM
TTGEAGQVLA EQDLAYIMFT SGSTGKPKGV QIGRESLWHF MKWVRQDFAL PELPVLMNHA
VFSFDLSLIP LLANLATGGH IVLNAKEDIA AENWLDRLKS NGVSVWVSTP SFAYQRLLSP
QFNSDYLPDL GVFVFIGEVL NKALVKQLRR RFPHAKILNS YGPTEATIAT TVIDITDEVL
NSGNDLLPVG AMMPDSRMEI TAEGELIIWG KNVMRGYLGL AQENAEKLLH RESEEFRGYK
TGDLGYEVDG ILYCQGRNDS QIKLNGYRIE INEIENRLLA MPDISEAVVL PLMKSGGGVL
RIAAFCVTKM APDAIKTSLS QVIPHYMVPS QIIIKDALPL NPNGKIDRKL LDTHARTN
|
|---|
| |