| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0821 |
|---|
| Symbol | |
|---|
| ID | 8120637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 952299 |
|---|
| End bp | 953273 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644851207 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003003179 |
|---|
| Protein GI | 251788458 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTAT TAAAACCCCT GGCTGTTTTC TGTTTATCAT TATCTCTGGC TCCCGCACTC
GCTCATGCTG AAGCCGTTGC GCCAGTCAAA ACCCAGCCCG GCTATTATCG CGTTATGGTC
GGGCAGTATG AAATCACGGC GTTGTCCGAC GGCACCAATA CCATGCCGAT GGACAAATTG
CTCACCCGTA CCCCGCGGGA AAAGATTATC AGCCTGCTGG AAGCCAGCTA CCTGAAACCC
CAGGTAGAAA CCTCGATTAA TGCCTTTTTA ATCAATACCG GTAAGAACCT GATTCTGGTC
GATAGCGGCA CCGGCGCGCT GGGCGGTAAA ACCACCGGCA AAACATTGGC CAACCTGAAG
GCTGCCGGGT ACAAACCGGA ACAAGTCGAT ACCGTCTTGG TGACTCATCT ACATGCCGAC
CATTTCGGCG GCCTGGTCAG CGACGGCAAG CTGGTGTACC CCAATGCCAC CATTTATGTG
AATCAGAAAG ACACGGATTT CTGGCTGAGT CCGGATAATC TGAAAAAAGC ACCGCAGGAC
AAAAAAGCCG GATTTGAACG TGTGCAGGAA GTATTCCGCC ACATTCGCGA AGCCGACAAA
CTGAAGACAT TCACCGATCA CCAATCTCTG CCGGCCAGTA TTACCGCGGT ACCTACGCCG
GGCCATACTC CCGGTCATAC TGCTTTTATG GTAAACAGCG ACGGGCAGAA AATGCTGCTG
TGGGGGGATA TCGTGCACGC GGAAGCAGTG CAAATGCCGC TGCCGGACAC CGCCATCGCC
TTTGATTCCG ACAGCGAGCA GGCGGTTCGC ACGCGTGGTG CATTACTGAA AGAGACGGTG
AAACAAGGTT ATTGGGTCGC CGGCGCACAC CTGCCGTTCC CCGGCATCGG CCACGTCGCC
GTGCAACAGG GTGAAAACGG TAAAACCAAC GGTTATCGCT GGTTGCCGGT CAATTACAGC
TTGTCTGGCT TGTGA
|
|---|
| Protein sequence | MTLLKPLAVF CLSLSLAPAL AHAEAVAPVK TQPGYYRVMV GQYEITALSD GTNTMPMDKL
LTRTPREKII SLLEASYLKP QVETSINAFL INTGKNLILV DSGTGALGGK TTGKTLANLK
AAGYKPEQVD TVLVTHLHAD HFGGLVSDGK LVYPNATIYV NQKDTDFWLS PDNLKKAPQD
KKAGFERVQE VFRHIREADK LKTFTDHQSL PASITAVPTP GHTPGHTAFM VNSDGQKMLL
WGDIVHAEAV QMPLPDTAIA FDSDSEQAVR TRGALLKETV KQGYWVAGAH LPFPGIGHVA
VQQGENGKTN GYRWLPVNYS LSGL
|
|---|
| |