| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0552 |
|---|
| Symbol | |
|---|
| ID | 8119835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 628659 |
|---|
| End bp | 629576 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644850941 |
|---|
| Product | ribonucleoside hydrolase RihC |
|---|
| Protein accession | YP_003002913 |
|---|
| Protein GI | 251788192 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGAC TCCCCATTAT TCTGGATACC GACCCCGGCA TTGATGATGC CGTCGCCATC
GCCGCAGCAT TGTTCGCTCC TGAGTTAGAT CTGCAACTGA TTACGACGGT CGCTGGCAAT
GTGGATGTGG AAAAAACCAC CCGCAATGCG CTGCAATTGC TGCATTTTTG GGATGCCGAA
GTGCCGGTGG CGAAAGGGGC GGCGACGCCG CTGGTGCGTC CGGTGCGCGA CGCCGCTTAT
GTTCACGGCG AGTCAGGGAT GGAGGGCTAC GACTTTGTGG CGCATGAGCG CACTGCGCTG
GAAAAATCCG CGGTACAGGC AATCTATGAC TGTCTTAACC GTAGCCCGGA GCCTGTTACA
TTGGTGACCA TCGGGCCGCT CACCAATATT GCCTTGCTGT TAACCCTCTA TCCGCAGTGT
AAAAGACAGA TCAAACGCCT GGTGATGATG GGCGGTTCGT CAGGACGCGG CAACTTTACG
CCGAATGCGG AATTCAATAT CGCGATTGAC CCGGAGGCGG CGGGGCGCGT GTTCGGCAGC
GGAATCGATA TCGTGATGTG TGGCCTGGAT GTGACGAATG ACGCCATGCT GTCGCCGGAG
TATCTGGCGG CATTGCCGGG AATGAACCGT ACCGGTGCCA TGTTACATGC GTTGTTCAGT
CACTATCGTA GCGGCAGTAT GGCGACCGGT TTGCGTATGC ATGACCTGTG CGCTATTGCT
TATCTGGTGA AACCGTCATT GTTTACCCTG CAGCACTGTT TTGTCGCGGT GGAAACGCAG
GGGGAATATA CCGCCGGCAC TACGGTGGTG GATCTCGAGC ATCGGCTGAA TCGACCGGCT
AATGCGCAAG TGGCGCTAGC GCTGGATGTA GCGGGTTTCC GCGCCTGGGT TGCGCAGGTG
TTGGCTTTGG CGCCTTAA
|
|---|
| Protein sequence | MNRLPIILDT DPGIDDAVAI AAALFAPELD LQLITTVAGN VDVEKTTRNA LQLLHFWDAE
VPVAKGAATP LVRPVRDAAY VHGESGMEGY DFVAHERTAL EKSAVQAIYD CLNRSPEPVT
LVTIGPLTNI ALLLTLYPQC KRQIKRLVMM GGSSGRGNFT PNAEFNIAID PEAAGRVFGS
GIDIVMCGLD VTNDAMLSPE YLAALPGMNR TGAMLHALFS HYRSGSMATG LRMHDLCAIA
YLVKPSLFTL QHCFVAVETQ GEYTAGTTVV DLEHRLNRPA NAQVALALDV AGFRAWVAQV
LALAP
|
|---|
| |