Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0067 |
Symbol | |
ID | 8119012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 80510 |
End bp | 81412 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644850448 |
Product | nickel/cobalt efflux protein RcnA |
Protein accession | YP_003002439 |
Protein GI | 251787718 |
COG category | [R] General function prediction only |
COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGATT TTTCCTTACT TTTGCAGCAG GGTGTCGCTA ATGCCTGGTT ATTTATCCCC AGCGCTGTTC TGTTGGGGGC ACTGCATGGC CTGGAGCCGG GTCACTCCAA GACCATGATG GCGGCGTTTA TCGTGGCAAT CCGCGGCACG GTGAGGCAGG CGGTAATGCT GGGCGTCGCC GCTACATTGT CTCATACCGC CGTGGTCTGG TTGATTGCGT TGGGCGGGAT GTATCTGAGC CGGCAGTTTA CCGCTGAATC CGCCGAGCCC TGGCTACAAT TTATTTCCGG CATCATTATT TTGGGGACTG CCATCTGGAT GTTCTGGCGT ACCTGGCGCG ACGAATGGGC ATGGAAACAA CACCAGCATA GTCATGGTCA CCATCATGAC CACGGCCACG AGCATCATCA TCACGACCAT GAACATGCCC ATCATCACGA ACATGCTCAT CATCACCATG ATGTTTCTCA TGCTGATCAT CATTCTGGTC ATCAACATGA TCACGCACAG CCTCAAGGTG AATATCAGGA TGCGCATGAA CGGGCGCACG CCGACGAGAT TCGCCAGCGC TTTGCCAACC GGGAGGCGAC CAATGGGCAG ATTCTATTGT TTGGCCTCAC CGGCGGATTG ATTCCCTGTC CGGCCGCTAT TACGGTGCTG CTGTTGTGTA TTCAGGTGAA GGCTTTTACG CTGGGGGCGG CACTGGTGGT CTGTTTCAGT ATCGGACTGG CATTGACGCT GGTAGCGGTT GGGGTCGGCG CGGCGCTCAG CGTACAACAT GCCGGCCGCC GCTGGCCGGG ATTCGCCGCA CTGGCGCGGC GGGCGCCTTA CTTTTCCAGT GTGCTGATCG CGCTGGTAGG GATGTATATG CTGTTGCATG GCTGGGTACG TTTGCCGTTA TAA
|
Protein sequence | MTDFSLLLQQ GVANAWLFIP SAVLLGALHG LEPGHSKTMM AAFIVAIRGT VRQAVMLGVA ATLSHTAVVW LIALGGMYLS RQFTAESAEP WLQFISGIII LGTAIWMFWR TWRDEWAWKQ HQHSHGHHHD HGHEHHHHDH EHAHHHEHAH HHHDVSHADH HSGHQHDHAQ PQGEYQDAHE RAHADEIRQR FANREATNGQ ILLFGLTGGL IPCPAAITVL LLCIQVKAFT LGAALVVCFS IGLALTLVAV GVGAALSVQH AGRRWPGFAA LARRAPYFSS VLIALVGMYM LLHGWVRLPL
|
| |