Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_3456 |
Symbol | |
ID | 8379161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 3905863 |
End bp | 3906753 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645002697 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003159944 |
Protein GI | 256831216 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.192038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTCC ACCAACTCAC CGCTTTTCAG ACCGTGGCCC GCACGGGCAA CCTGACTCGC GCGGCCGAGG CGCTGCATCT GAGCCAGTCC GCCCTGTCCA CCCAGATCAA GAACCTGGAG GAGGAGCTTG GGGTCGCGCT CTTCGCGCGC CAGGCCAAGG GCATGCGCCT GACCAGGGCT GGGGAAACGC TGCTGCCTCA CGCCGAAACC GTACTCGAAA AAACGACGGA GCTGGGGCGC ACGGCCATGA GCCTGCGGGA AGAGGTGGCC GGAAAGCTCA GCATCGGCCT CAACACCGAT CCGACATTCC TGCGCCTGAA CCGGGTCATC CGCGCCTTCA CCACCACCCT GCCGCAGGTG ACCCTGACCT TCTGCATCAG CCAGACCCTG TCCACCGAGG CCATGCTCAA GCGCGGCGAG ATGGACATGG GCTTCGCCTT CGGCACCAGC TTCTCACCCG GAGTCCGCTC GCTCCAGCTG GCCACCACCC CGGTCAGCGT GGTCGTGCCG CGCCACCTGG CAGGCGACCC TGCCGCCCTG GACTGGCCCG CCGTCGCGGC CATGCCCTGG ATCTGGACCA CCTGCCAGTG CCCGTTCCAT CTGCTCTGCC AGAAGCGCAT GGACGAGGCC GGCGTCCGGC CCAACACGGT GACCGATGCC GTGGACGAGA ACATCGTCAA GGAGCTGGCC ATGGGAGGAA TGGGCGTGAC GCTCCTGCGC AGGAGCGAGG CCGAGGATGT GGTCCGGCAG GGCGCGGGCG TGATCTGGGA GCCGGGCGAG ATTCAGGTGC CGCTGTGCCT GACCTGGCTC TCACGGCGCG GCGACGACCG CCTCATCACG AGCGCGGCCG CGCACATCGC CGCCATCTGG ACGGAGAACA AGGACGGCTA G
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Protein sequence | MEFHQLTAFQ TVARTGNLTR AAEALHLSQS ALSTQIKNLE EELGVALFAR QAKGMRLTRA GETLLPHAET VLEKTTELGR TAMSLREEVA GKLSIGLNTD PTFLRLNRVI RAFTTTLPQV TLTFCISQTL STEAMLKRGE MDMGFAFGTS FSPGVRSLQL ATTPVSVVVP RHLAGDPAAL DWPAVAAMPW IWTTCQCPFH LLCQKRMDEA GVRPNTVTDA VDENIVKELA MGGMGVTLLR RSEAEDVVRQ GAGVIWEPGE IQVPLCLTWL SRRGDDRLIT SAAAHIAAIW TENKDG
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