Gene Dbac_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3456 
Symbol 
ID8379161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3905863 
End bp3906753 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID645002697 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003159944 
Protein GI256831216 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.192038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTCC ACCAACTCAC CGCTTTTCAG ACCGTGGCCC GCACGGGCAA CCTGACTCGC 
GCGGCCGAGG CGCTGCATCT GAGCCAGTCC GCCCTGTCCA CCCAGATCAA GAACCTGGAG
GAGGAGCTTG GGGTCGCGCT CTTCGCGCGC CAGGCCAAGG GCATGCGCCT GACCAGGGCT
GGGGAAACGC TGCTGCCTCA CGCCGAAACC GTACTCGAAA AAACGACGGA GCTGGGGCGC
ACGGCCATGA GCCTGCGGGA AGAGGTGGCC GGAAAGCTCA GCATCGGCCT CAACACCGAT
CCGACATTCC TGCGCCTGAA CCGGGTCATC CGCGCCTTCA CCACCACCCT GCCGCAGGTG
ACCCTGACCT TCTGCATCAG CCAGACCCTG TCCACCGAGG CCATGCTCAA GCGCGGCGAG
ATGGACATGG GCTTCGCCTT CGGCACCAGC TTCTCACCCG GAGTCCGCTC GCTCCAGCTG
GCCACCACCC CGGTCAGCGT GGTCGTGCCG CGCCACCTGG CAGGCGACCC TGCCGCCCTG
GACTGGCCCG CCGTCGCGGC CATGCCCTGG ATCTGGACCA CCTGCCAGTG CCCGTTCCAT
CTGCTCTGCC AGAAGCGCAT GGACGAGGCC GGCGTCCGGC CCAACACGGT GACCGATGCC
GTGGACGAGA ACATCGTCAA GGAGCTGGCC ATGGGAGGAA TGGGCGTGAC GCTCCTGCGC
AGGAGCGAGG CCGAGGATGT GGTCCGGCAG GGCGCGGGCG TGATCTGGGA GCCGGGCGAG
ATTCAGGTGC CGCTGTGCCT GACCTGGCTC TCACGGCGCG GCGACGACCG CCTCATCACG
AGCGCGGCCG CGCACATCGC CGCCATCTGG ACGGAGAACA AGGACGGCTA G
 
Protein sequence
MEFHQLTAFQ TVARTGNLTR AAEALHLSQS ALSTQIKNLE EELGVALFAR QAKGMRLTRA 
GETLLPHAET VLEKTTELGR TAMSLREEVA GKLSIGLNTD PTFLRLNRVI RAFTTTLPQV
TLTFCISQTL STEAMLKRGE MDMGFAFGTS FSPGVRSLQL ATTPVSVVVP RHLAGDPAAL
DWPAVAAMPW IWTTCQCPFH LLCQKRMDEA GVRPNTVTDA VDENIVKELA MGGMGVTLLR
RSEAEDVVRQ GAGVIWEPGE IQVPLCLTWL SRRGDDRLIT SAAAHIAAIW TENKDG