| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3215 |
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| Symbol | |
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| ID | 8378911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3644829 |
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| End bp | 3647165 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645002451 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_003159706 |
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| Protein GI | 256830978 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTC TGAAAATATT TCTGGCGTTC ATTGTGCTGG GCGTATTCCT GGCTGCGGGC
GCAGGAGTAG GTCTCTACTA TTGGGCGCAG GAAGATCTGC CCGGATTCAC GAAGCTCAGC
GATTATTCTC CGGCCCTGGC CACGACGGTC CGGGCCCGCG ATGGCAGAAT CCTCGGTTAT
TTTTATCGAG AAAAACGATT TCTTATCCCT CTGTCGATGA TGAGCCCGAT TACGGTCAAG
GCCTTCCTGG CCGCCGAGGA TTCCGGGTTC TATCAGCACG AGGGCGTGGA CCTGCCCGGT
ATTTTTCGGG CGGCCGTCAA GAATTTCATA GCCGGAGGCA TTGTCCAGGG CGGCAGCACC
ATTACCCAGC AGGTCATCAA GTCCATGCTG CTGACTCCCG AGCGCAGCTA CGAGCGCAAG
CTCAAGGAAG TCATCCTGGC CTATCGCCTG GAAAAATACT TGAGCAAGGA TGAGATCCTG
ACAATCTATC TCAATCAGAT CTACCTTGGC GCCAAGGCCT ACGGGGTGGA AGCCGCCGCG
AGGGAATATT TCGGCGTGAA CGCTTCCCAG CTGAGCCTTG CCCAGGCTGC GTTGCTGGCC
GGCCTGCCCA AGGCTCCGTC GCGGTATTCC CCCTATGGGA ACCCGGAGCG GGCCAGGGAG
CGGCAGCTCT ATGTTCTGGC CCGGTTGAGA GATCTGGGCT GGATCGCCGG CACCGAGTAC
GAAGCCGCCG TGAATGAACC CCTGGTTTAC GGGGCGCAGG AAGATCCGTC CTGGAAAGTG
GGCCCTTACT ATCTTGAAGA GGTGCGGCGG CAACTGGTCG ACCGGTATGG CGAAGACATG
GTCTATGGCG GAGGCCTGCA AGTGCGAACC GCCATGGACA TGGACCATCA GATCATTGCC
GACCAGGCCC TACGTACGGG TTTGGTTGAG ACCGCCAAAC GTCACGGCTG GCAAGGGCCG
GTCAAGCATC TCGACGTGGG CGGGTATGAA GAGTTCCTGG ATGCTCAGCA GCTCGGCGAG
TCCAGTCCCG GAGATTGGAT GCAGGTTCTG GTCACGGGCG TGGAAAAAGC CGGGGCTACA
GTGCGCTTCG GCGACAAATC GGGCATTGTT CCCGTCGCTT CCATGAGCTG GGCCCGGGTG
CCCAACCCCA AGCTGGCGCC GGAAGAGGCG GGCAAGGTGA GCGACGCCCG CAAGGTGGTC
AAGCCCGGCG ACGTGATCTG GGTCTCGGTG GAAGAGATGC TGGAAGACAA GCCCTGGAAG
CTTCAGCTCG AGCAGGAACC CAAGGTCGAA GGCGCGCTTG TGTCCATGGA TCCGCAGAGC
GGGGAGGTGC TGGCGCTGTG CGGGGGCTAC GATTTTTTCC GCAGCCAGTT CAACCGGGCG
ACCCAGGCAC TGCGCCAGCC CGGATCGGCC TTCAAGCCCA TCGTCTATTC CGCGGCGCTG
GACAACGGGT TCACCGCCGC AAGCATCGTG CTGGATGCCC CTATCGTCTA TCAGGACGGC
AGCGGGGAGA TGTGGAAGCC TGAAAACTTT GAAGGGATTT TCTACGGTCC GACGCTCCTG
CGCACGGCCC TGGTCAAATC CCGTAACCTC GTCACCATTC GCGTGGCCCA GCAGGTGGGC
ATCGATACCA TCGTCGAGCG AGGCAAGGCT CTGGGGCTGA CCGGAGTCAT GGAACCGAAT
CTTTCCCTGG CCCTGGGGTC CGGGCAGTTT ACGCCGCTCA ATTTGTGTCA GGCCTATACG
GCGTTTCCCC GTGGCGGCAC CAGCATCAAG CCCCGGCTGA TCGAAAGCGT GGTCTCGCCC
TGGGGCGAAC AGCTGTTTTC GGCCACGCAG GAAGTGAGCG AGGCCATGCC CCCGGAAACC
GCCTATATCA TTTCGCACCT CTTGCAGCAG GTCGTGCAGC ACGGGACAGG TGCCCGCGCC
AAAGTTCTGG GACGGCCGGT GGCGGGCAAG ACCGGCACCA CCAACGACGA ACAGGATGCC
TGGTTCATGG GCTTCTCGCC CTATCTGCTG ACCGGGGTCT GGGTGGGCTA CGACCAGGTC
AGACCCATGG GCAAATACGA GACCGGCGCC CGGTCCGCCC TGCCTATCTG GATCGACTAC
CGGAGCAAGG TCGAACCAAA CTACCCCGTG CAGGACTTTC AGGCACCTCC CGGCATCGTC
ATGGCCCGGG TGGATGCACG CACCGGCCGT TTGGCAGGTC CGGGAGCGGT CGAAGCCTAC
ATGCTGCCCT TCCAGAACGG CACGGAGCCG TTGCCGTCCG CGGGCCTCGA TGAACTGGAC
GCCGATCCGG GCTCCTCCAA TGCCGGCGGG GAAAGTCTGC TCAAGCAGAT CTTCTAG
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| Protein sequence | MKVLKIFLAF IVLGVFLAAG AGVGLYYWAQ EDLPGFTKLS DYSPALATTV RARDGRILGY
FYREKRFLIP LSMMSPITVK AFLAAEDSGF YQHEGVDLPG IFRAAVKNFI AGGIVQGGST
ITQQVIKSML LTPERSYERK LKEVILAYRL EKYLSKDEIL TIYLNQIYLG AKAYGVEAAA
REYFGVNASQ LSLAQAALLA GLPKAPSRYS PYGNPERARE RQLYVLARLR DLGWIAGTEY
EAAVNEPLVY GAQEDPSWKV GPYYLEEVRR QLVDRYGEDM VYGGGLQVRT AMDMDHQIIA
DQALRTGLVE TAKRHGWQGP VKHLDVGGYE EFLDAQQLGE SSPGDWMQVL VTGVEKAGAT
VRFGDKSGIV PVASMSWARV PNPKLAPEEA GKVSDARKVV KPGDVIWVSV EEMLEDKPWK
LQLEQEPKVE GALVSMDPQS GEVLALCGGY DFFRSQFNRA TQALRQPGSA FKPIVYSAAL
DNGFTAASIV LDAPIVYQDG SGEMWKPENF EGIFYGPTLL RTALVKSRNL VTIRVAQQVG
IDTIVERGKA LGLTGVMEPN LSLALGSGQF TPLNLCQAYT AFPRGGTSIK PRLIESVVSP
WGEQLFSATQ EVSEAMPPET AYIISHLLQQ VVQHGTGARA KVLGRPVAGK TGTTNDEQDA
WFMGFSPYLL TGVWVGYDQV RPMGKYETGA RSALPIWIDY RSKVEPNYPV QDFQAPPGIV
MARVDARTGR LAGPGAVEAY MLPFQNGTEP LPSAGLDELD ADPGSSNAGG ESLLKQIF
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