| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3175 |
|---|
| Symbol | |
|---|
| ID | 8378871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 3593948 |
|---|
| End bp | 3594775 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645002411 |
|---|
| Product | TatD-related deoxyribonuclease |
|---|
| Protein accession | YP_003159666 |
|---|
| Protein GI | 256830938 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCG CGGATTCTTT ACTCGCGTCC GGTCTGCCTG ACCTCGTGGA CGCCCATTGC
CACCTGCAGG ACGGCTTTTT GCGTCACGCT CTGGAACCTG CCTTGCTTCG GGCCCGCGCC
GCCGGGGTGC GCATGATGTG CTGCAACGGC ACCCACGCAG GAGATTGGCG GTATGTGCTG
GGGCTTGGGC GCAGCCACGC CGACATCTGC GTGTCCCTGG GTCTGCATCC CTGGTATGTG
GGAGAGCGGG GGACCGATTG GCTGGCCCGC CTTGAGGAGT TGGTGGCGGA CAATCCCGTC
GGGATAGGCG AGATCGGTTT GGACAACGCT TTGGACGCGC GCAACGACGT TGAGCAGGAA
GAGGTTTTTT TGGCCCAGAT GGAGCTGGCT GTGCGTTACA GGCGTCCCGT CACCATCCAC
TGCCGCAAGG CCTTCGGCCG TTTGGCGGAT CTGATCGGAG CCATGCGCGA GCGGCCGCCG
TATATGATGC TGCATGCCTA TGCCGGGTCC CATGAGATGG TCCCGGTTTT CGAGAAGCTG
GGCTTTTACA TTTCCATTTG CGCCTCCATC ACCAGGACCG CGAACCGCAA GGCGCGTACG
GCCTGCGTCC GGGTTTCGCC CGACAGGCTG CTGGTGGAGT CCGACAGCCC GGCCATCGCG
CCCGTGGGCG TGGATTTCGA GCGCAACGAG CCTGCCTATC TGCCCATGGT GGTCGATGTG
CTGGCAGAGT TGCGGGGGGA GAGACCGGAG GTGGTGGCGG CGCGGACGGC GGCCAATGCA
AGGCTGTTTT TCCGGTGTTG CGCGGGCGGG GACGCGGCTG CGGAATGA
|
|---|
| Protein sequence | MNGADSLLAS GLPDLVDAHC HLQDGFLRHA LEPALLRARA AGVRMMCCNG THAGDWRYVL
GLGRSHADIC VSLGLHPWYV GERGTDWLAR LEELVADNPV GIGEIGLDNA LDARNDVEQE
EVFLAQMELA VRYRRPVTIH CRKAFGRLAD LIGAMRERPP YMMLHAYAGS HEMVPVFEKL
GFYISICASI TRTANRKART ACVRVSPDRL LVESDSPAIA PVGVDFERNE PAYLPMVVDV
LAELRGERPE VVAARTAANA RLFFRCCAGG DAAAE
|
|---|
| |