Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_3171 |
Symbol | |
ID | 8378867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 3588459 |
End bp | 3589796 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645002407 |
Product | peptidase M48 Ste24p |
Protein accession | YP_003159662 |
Protein GI | 256830934 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCTCTA TTTTTGACGA TCGTGCCTAC CGGGGCACTC TGACCCGCCG GGACTTCATC AAGCTTTCCG CCCTGGCCGC CGTGTCCACG GCCGTGGCCG GGTGCGCTGC CAATCCCGTG ACCGGGCATA GCCAGCTCAT GCTCATGGGC GAGGGTGAGG AAATCCAGGC CGACAGGGCC AGTTCGCCGC ACCAGTTTTC CGCCGACTAC GGCCTAAGCC AGGACACGGC CCTGAATGCC TATGTCAGCG GCGTGGGCGC TCGTTTGGCC CGGGTCACGC ACCGCGCGCA CATGCCGTAC AAATTCAATG TGGTGAACGC GACATATGTG AACGCCTACG CCTTTCCAGG GGGAAGCATC GCCGTCACGC GCGGCATTCT GGCCGAACTG GACAACGAAG CCGAACTGGC CGGACTGATC GGCCATGAAC TCGGGCATAT CAATGCCCGG CACACGGCGG CGCGCATGTC CAAGAGCAAG ATTCTGGGCG CGCTGGTCGG AGGTGCTTCG CTTATCGCCG GTACGGCCAG CCAGAGCCTG GGCAATCTGG CGGGGACCGT GGGCGGACTG GGGGCCAGCC TGTTTCTGGC CAAATACAGC CGCGAGGACG AGCGGCAGGC GGACGAACTG GGCATGGAAT ACATGGTCGG CGCCGGCTAC ACGCCTCAGG GCATGGTCGG ACTCATGGAT GTGCTGCGTT CCATGAGCAA GCGTCAGCCC AGCGCCATCG AGGCCATGTT CTCCTCGCAC CCCATGAGCA CCGAACGTTA CGAAATGGCC GTGGCCCGAT CGCGTACCCG TTTCGGCGGT AGCGGGAATC TGCCGGACTA CCGGGAGCGC TACATGGACT CCACGGCGAG GCTGCGCAAG CTTGGTCCCA TGTTCAAGCT GTTTCAGGAA GGGGACAAGG CCATGGCCGC CAGGGAATAC GCCGTTGCCC AGAGCCGCTA CGCCGAGGGC CTGAAGCTGT CTCCCAATGA TTATGCCGGG CTGGTCATGA TGTCCAAGTG CATGATCGCC CAGAAGAACG GCAAGGGAGC CGCAGACTAT GCGGCCAGGG CCAAGCGGGT CTATCCCACC GAGGCCCAGG CCCAGCACAT GCACGGCGTG GCCTCCATCC TCAACAAGGA TTATGCTGCG GCGCTGGCCG ATTTTTCGGC TTACGAGCGG ATCCTGCCCG GCAATCCCTC GACGGTTTTC ATGAAGGGCT TTTCCTACGA GGGCATGAAG AACAAGCAGA ATGCGGCTCA GGAATACCAT CGCTACCTGA AAGTCGTGAC CCAGGGCGAA ATGGCCCAGC ACGCCTATTC CAGGCTAAAA ACCTGGGGAT ACCTCTAA
|
Protein sequence | MSSIFDDRAY RGTLTRRDFI KLSALAAVST AVAGCAANPV TGHSQLMLMG EGEEIQADRA SSPHQFSADY GLSQDTALNA YVSGVGARLA RVTHRAHMPY KFNVVNATYV NAYAFPGGSI AVTRGILAEL DNEAELAGLI GHELGHINAR HTAARMSKSK ILGALVGGAS LIAGTASQSL GNLAGTVGGL GASLFLAKYS REDERQADEL GMEYMVGAGY TPQGMVGLMD VLRSMSKRQP SAIEAMFSSH PMSTERYEMA VARSRTRFGG SGNLPDYRER YMDSTARLRK LGPMFKLFQE GDKAMAAREY AVAQSRYAEG LKLSPNDYAG LVMMSKCMIA QKNGKGAADY AARAKRVYPT EAQAQHMHGV ASILNKDYAA ALADFSAYER ILPGNPSTVF MKGFSYEGMK NKQNAAQEYH RYLKVVTQGE MAQHAYSRLK TWGYL
|
| |