| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3033 |
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| Symbol | |
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| ID | 8378728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 3431210 |
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| End bp | 3432994 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645002268 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003159524 |
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| Protein GI | 256830796 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000430768 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATT TCAACACCAG GCGAATACTC TACTCTTTAA CGTACCTGCT GGAAGTTTTG
ACCGCTGCGG GCGAGATAAG CGAGGCGCAA GCCAAGATCA TCATGGACCA CGCCGTCAAG
AACGGGATCG ATGTGGAAGG GCCGGACGGA ATCGACGACC TGATCCGTTT CAACATCCGC
AAGCCGTCCA GTGAGGCCGG GCATCCGGAA TCGCGCATCA CGGAGGATGT CATCCTCAAA
GCCGTCGCCT GGCGGGAGGG GCTTGAATTT CGACGGGTCG ACCCCTTTGA CCTGGATCTG
GAGGTGACCA CCAAGACCAT CTCCGAGAGC TTCGCCCGCA TGAATACCCT GGTTCCGATC
ATGATCCGCG ATGGCGAGCT GGAGCTGGCC GTCTTCAATC CTTTCCGCCC GGAGCTGTGG
CAGGACATGG AGCGGGTCAG CGATCTGCCC TACAAGGTTT TCCTGAGCAC CCGGCAGGAC
ATAAACCGCC TCATTGACGA CTATTATCAA TTTCGCACCG CCATTCAGGC CGCGCAGATC
GAGTTCATGG ACTCCAGCGA GATCGGCAAT CTCGAAGCGC GGGTCAAGGT CTCGGAAAAA
TCCGACCCCG AATCCCATCG GCACATCATC AAGGCCGTGG ATTATCTGTT GCGCTCGGCC
CTGCGTGAGC GCGCCAGCGA CATTCACATC GAGCCCAAAA GGGATTTTGC GCTGATCCGA
TTTCGTATCG ACGGCATTCT GCACGACCTG CACCGCCTGC CCATGACCGT GCATCTGGCC
ATGATAAACC GTTTGAAGGG GATGAGCCGA CTCGATATTT CCGAGAAGCG CAGGCCCCAG
GACGGACGCG TGCAGCTGGT TTTGGCGGGA GTGCCGACGG ACGTGCGCGT TTCGACCATT
CCCGTGGCCT TTGGCGAGAA GATGGTGCTG CGGCTCCTTT CCAGCGACAG CACGCTCAAG
AATCTCGAAG AGCTGGGCAT GGGCCCTGAC CATTATGCGA CCTACAGCAC GTTTCTGAAC
AAGACGTACG GGCTGATTCT CGTCACCGGC CCCACGGGGA GCGGCAAATC GACCACGCTG
TATTCGACCC TGAAGGTGCT GGCCAACCCG CAGGTCAACG TGGTCACGCT CGAAGATCCC
ATCGAGATGG TGGTGGATGA TTTCAATCAG ATCGGCGTGC AGACGAAAAT CGGGGTGACC
TTCGGGCAGA TGCTGCGGCA CATCCTGCGT CAGGACCCCG ACATCATCAT GATCGGTGAG
ATGCGCGACC TGGAGACCGC CGAGCAGGCC ATGCAATCGG CCCTGACCGG GCATATCGTC
TTCTCGACCC TGCACACCAA CGACGCCAGC GCGGCCCTGA CCCGCCTGCT CGATCTGGGC
CTTGACGCCT ATCTCATCAA TGCGGCCGTC ATCGGCTGCA TCGCCCAGCG CCTGGTGCGT
AACATCTGTC TGCACTGCAA GGTGCAGTAC AAGCCCGATT ACGAGGAGAT AAAGGCCCTG
GGACTGGACA GCTACATCCA GCCGGAACAA CTGTTGTGGA AGGGCCGCGG GTGCGACCAC
TGCCGCCAGA CGGGGTATTA CGGGCGAACC GGCATCTTTG AGATCCTGCC CTATGACACG
GAGGTCAAGG ACGCCATCCG CAAGAACATC GACCTGGGCG ATCTGCGCGC AATGGTGCGT
AAAAAAGGGG TTCGGTCCCT GTTTGACGAC GGCATGGCCA GGGTCGTGCA AGGTGTGACC
ACGGTGGAAG AGGTTCTGCG CGTGGCAGGA GGTTCCGTCG ATTAA
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| Protein sequence | MDNFNTRRIL YSLTYLLEVL TAAGEISEAQ AKIIMDHAVK NGIDVEGPDG IDDLIRFNIR
KPSSEAGHPE SRITEDVILK AVAWREGLEF RRVDPFDLDL EVTTKTISES FARMNTLVPI
MIRDGELELA VFNPFRPELW QDMERVSDLP YKVFLSTRQD INRLIDDYYQ FRTAIQAAQI
EFMDSSEIGN LEARVKVSEK SDPESHRHII KAVDYLLRSA LRERASDIHI EPKRDFALIR
FRIDGILHDL HRLPMTVHLA MINRLKGMSR LDISEKRRPQ DGRVQLVLAG VPTDVRVSTI
PVAFGEKMVL RLLSSDSTLK NLEELGMGPD HYATYSTFLN KTYGLILVTG PTGSGKSTTL
YSTLKVLANP QVNVVTLEDP IEMVVDDFNQ IGVQTKIGVT FGQMLRHILR QDPDIIMIGE
MRDLETAEQA MQSALTGHIV FSTLHTNDAS AALTRLLDLG LDAYLINAAV IGCIAQRLVR
NICLHCKVQY KPDYEEIKAL GLDSYIQPEQ LLWKGRGCDH CRQTGYYGRT GIFEILPYDT
EVKDAIRKNI DLGDLRAMVR KKGVRSLFDD GMARVVQGVT TVEEVLRVAG GSVD
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