Gene Dbac_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2189 
Symbol 
ID8377864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2516598 
End bp2517788 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content59% 
IMG OID645001412 
Productprotein of unknown function UPF0118 
Protein accessionYP_003158689 
Protein GI256829961 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.289237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAACA AATCAGCAGA TCAGACAAGA CGAAGCTTTG TTTCGTATCA TATCATTCTT 
GGCGCAGTGT TGTTCGCCGG CATTCAGTCC TTCACGCTGC TCTCTCACAT TCTGTTGTCC
TTTCTGCTTG TCATGCTGAT TTCACTCGCG CTCAACCCCG CGATTTCGCG GATGCGCGCA
TGGACCGGCG GCAGGGCACT GCCAACGGGA CTGATCCTGG CAGGATTCCT TTCAATCCTG
GTCTTGACCG GGTGGGCCTT CCTCGGGCCA ATGCAGACTT CGATCACGAA TATCTCGAAG
CAATTGCCCG GCTACTGGGA ACGCCTCCAG AAACCCTTGA TCATGATGGA ACAACGGGCC
GCAATCTCGG AGGAAAAACT CCAGGCGGAA GTCACCACTG AAATCGCCCG GGCCGAACGG
CTGGCAGGCG AACCCGTGGT CCCGGTCGCG CCCCAAAAGC CCCCTGCGCC GGAAGATTCC
GGCTCTCTTC GTTCCAGCTT GAGCGAAATG CTGGGAGAGG CGGTCAGCAG CTTCACCAGC
GTGGCCTTCA ATGGAACCCA GATCCTCATT GTGATGGTGA CCGTCTTCTT CGGCGTGTTC
TTCACGCTCC TGAATCCCCG CCCGATCGTG GGCGTCATAT TCGCCATCGT GCCCGTGCGT
CACCACGACA AGGCCCTTGC CGTGGCGCAG CGCATCGGGA TGTTCGCGCC ACGGTGGGCC
GGAGCCATGC TGGTGGGCAT GGTGACGATC GGCATGCTTG TTTTCCTGAC CATGTGGCCG
ATATTCGGAT TCACGGACGC GCTGGTCCTG GGCCTGATCG CAGGCATCCT GGAAGCGGTC
CCCTTCCTGG GGCCGACACT CAGCTCCATA CCGGCGCTGC TGCTCGCGCT CGGCATGGGA
GGCATGACGA CACTGTGGGT GGCCCTCATC TATGTCGCGA TCCAAATCCT CGAAAACAAC
ATCATCGTCC CATTCGTCAT GGCCGGCGGC ATGAAACTGC ATCCGACGGC GGTGATCTTC
TCGATGCTCC TGTGCGTCGG GGCCTTCGGC GTACTCGGAG TCCTGGTCGC AGCCCCGCTG
GTTGCCATCG CGAGCATCCT GCATGAGGAA CTGTATCGAA AGCAATATCT TCAGACAGTT
ACCGATGAAT ACATACGTGA AATGGCGCGA AAAGCTCTGC ACGAAAAATG A
 
Protein sequence
MPNKSADQTR RSFVSYHIIL GAVLFAGIQS FTLLSHILLS FLLVMLISLA LNPAISRMRA 
WTGGRALPTG LILAGFLSIL VLTGWAFLGP MQTSITNISK QLPGYWERLQ KPLIMMEQRA
AISEEKLQAE VTTEIARAER LAGEPVVPVA PQKPPAPEDS GSLRSSLSEM LGEAVSSFTS
VAFNGTQILI VMVTVFFGVF FTLLNPRPIV GVIFAIVPVR HHDKALAVAQ RIGMFAPRWA
GAMLVGMVTI GMLVFLTMWP IFGFTDALVL GLIAGILEAV PFLGPTLSSI PALLLALGMG
GMTTLWVALI YVAIQILENN IIVPFVMAGG MKLHPTAVIF SMLLCVGAFG VLGVLVAAPL
VAIASILHEE LYRKQYLQTV TDEYIREMAR KALHEK