Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2154 |
Symbol | |
ID | 8377829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 2466871 |
End bp | 2468460 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645001377 |
Product | transcriptional regulator, NifA subfamily, Fis Family |
Protein accession | YP_003158654 |
Protein GI | 256829926 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.414477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCGG CAACAAATAT GAGGACGCAC TCGTCGCGCA TGATCGGTGC GCAGGCCATG GGCCGCGAGC TTGTCTCGTC CCTGGGCAAG GTCTCTTCGC GCAACCTGTT TCTGCAGAAC CTGTCTCGGC TTTTCCGCCA GCAATTCAGT TTTGACCGTC TTTGCATCAA CCTCTACGAT CCCAACAGCG AGCTGCTGAG CTACTTCACC GCTGCGGAGG GAGCGGTCAT CAATTCCCTT TCCCCGATTC GCAAGGCCGA GAAGACCACC GTCGCCGGGC ATGTCATCGA GTCGCGCAAG CCTGTCGTCA TCACCGACGT TTCGCAGCAT TTCGTGGAAT CCATGCTCCA TCCCATGGCC GAGGCGGGTC TGACCACGAC CATGGCTTTT CCGCTCATCC TCAACGACAA GATCATCGGC ACCCTGCACT GCTCCTTCCG GAAGAAACCG GAGAACCTCT ACGAGATCAT GGAGTTCTTG CTGGAGCTTT CCCCCTATGT GGCCGCGGGC CTGGGGGCGC TTCTGGCCAT GGAGCACCTT GAACAGGGCG CCAGCCTGAA TCAGGTTCCG TACACCGGCG AGACGGGTGA GAGCGAGACG TTCTTTTTCG AAAGCCAGTC CATGCGTCGC TTCATGGCCA GGGTACACGC CGTGGCGGTG CTGGATATTC CCGTGCTTAT CCTCGGAGAG ACGGGAACCG GCAAGTCGCG GCTGGCCCAT TACATACATT GCCGCAGCCA GCGCCGCGAG AAGCAGTTCG TGAAGGTCAA CTGTCCGGCC ATGGCCTCGA CGCTTTTTGA GAGCGAACTC TTCGGCCATG CCAAGGGGGC GTTCACCGGG GCGGCGACGA AACGCGTCGG CCGGTTCGAG CTGGCCCACC AGGGGACGCT GTTTCTGGAT GAGATCGCCG AACTCAATCA GGAAATGCAG AGCAAGCTGC TGCATGTCCT CGATGACAGC TGTTTCGAGC GGGTCGGGGA AAGCGTGTCT TTTTCCGTCG ATGCCCGGAT TATCGCCGCG ACCAACGTCA AGATGCGCGA GGCCGTCACG CAGGGGAAGG TGCGCAGCGA CTTTTACTAC AGACTGTCGT CCTGCACGCT GGAGATTCCG CCCCTGCGCG ACAGGATTGA AGACATCCCC GCATTGTCGA GCTATTTTGT CAGCCAGCTC TGTTCGCAGT ACTCCCTGCC GCAAATCCAG CTATCCCAGG ATCTGCTGCA CCAACTCCAG ACGCACTGCT GGCCGGGCAA TGCCCGCGAA TTGCGAAATG TCATCAGCAC CCTGCTCATA AAGCATGGGC TTTCCGGAAA GCTGAGTCGC CAGGATGTCC AGGATGCGCT GCGTACGGAT GCGCTGGCTT ATCCGCAGGC GTCGCCTGAG TCCCTTCCGG CACCGCCGAT GCCCCCTTCG AGCTGCAGTC TTGAGGAGGT GGAGCGGCAG CATATCAAAG AGGCCCTGTT CCGCTCCGGC GGCGTCATTT CCGGGCCCAA GGGCGCGGCG AAGATGCTCG GCCTGTCGCG TTCGACGCTG CAGAGGCGCA TGCTCAAGCT GGGGATAGAT GCTTCGGCTT CGAAAAACGG GGCGCGGTGA
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Protein sequence | MDSATNMRTH SSRMIGAQAM GRELVSSLGK VSSRNLFLQN LSRLFRQQFS FDRLCINLYD PNSELLSYFT AAEGAVINSL SPIRKAEKTT VAGHVIESRK PVVITDVSQH FVESMLHPMA EAGLTTTMAF PLILNDKIIG TLHCSFRKKP ENLYEIMEFL LELSPYVAAG LGALLAMEHL EQGASLNQVP YTGETGESET FFFESQSMRR FMARVHAVAV LDIPVLILGE TGTGKSRLAH YIHCRSQRRE KQFVKVNCPA MASTLFESEL FGHAKGAFTG AATKRVGRFE LAHQGTLFLD EIAELNQEMQ SKLLHVLDDS CFERVGESVS FSVDARIIAA TNVKMREAVT QGKVRSDFYY RLSSCTLEIP PLRDRIEDIP ALSSYFVSQL CSQYSLPQIQ LSQDLLHQLQ THCWPGNARE LRNVISTLLI KHGLSGKLSR QDVQDALRTD ALAYPQASPE SLPAPPMPPS SCSLEEVERQ HIKEALFRSG GVISGPKGAA KMLGLSRSTL QRRMLKLGID ASASKNGAR
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