| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2119 |
|---|
| Symbol | |
|---|
| ID | 8377794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2427738 |
|---|
| End bp | 2428442 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645001342 |
|---|
| Product | Methyltransferase type 12 |
|---|
| Protein accession | YP_003158619 |
|---|
| Protein GI | 256829891 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.54361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATGT ATTCCAAGTT CGCTGTCTGG TACGATCGCA TTTTTCCCTT TAGCCCCGGT
GTCTATGCCT ACTTGACGCA CCACTTGGGA GACCTCGGCG GGCCGGTTTT GGATCTGGGC
TGCGGTACGG GCGACTATTG CGCGGCGTTC ACCCGCGACG GCGTGCGGGC CGTGGGCGTG
GACCTCGATT CATCCATGAT CTCCCAGGCC CGCGCCCGTG GGCCGGAGAC CGAGTTTCAT
GTTTTGGACA TGGCGGAATT TGCGACCATC GGCGGTCCCT GGAACATGAT CTACTCCATC
GGCAACACTG CGGCCCACCT GCCAGAGGAC CGTTTCTGGG GGTGCGTCGA GGACGTGGCC
GCGAGGCTTC TGCCCGGCGG CATCTGGATC GTGCAGGTCA TGAACTGGGA CTATGTGTTG
GGCCTGCCCG CCTTCGCCTT CCCGGCCAAG GTCATGGACG GGGCGGTCTT TCATCGCGCC
TATGAGGACA TCACCCCGGA AGGCCTGACC TTCCATACCG GTCTCGACAT CGAAGGCCGC
AGGGTCTTTG ACGACCAGGT GCGCCTCTAT CCCCTGACCT CGGCCGAGAT CATCGCGGGG
CATGAGGAGC GCGGATTCCG GCTGGTCGAA CACGTGTCCG ACTATGCCGG CAGCGGGTTC
GATGCGGAGG TTTTTTCGGC GAACATTTTT GTTTTCAAGC GATAA
|
|---|
| Protein sequence | MSMYSKFAVW YDRIFPFSPG VYAYLTHHLG DLGGPVLDLG CGTGDYCAAF TRDGVRAVGV
DLDSSMISQA RARGPETEFH VLDMAEFATI GGPWNMIYSI GNTAAHLPED RFWGCVEDVA
ARLLPGGIWI VQVMNWDYVL GLPAFAFPAK VMDGAVFHRA YEDITPEGLT FHTGLDIEGR
RVFDDQVRLY PLTSAEIIAG HEERGFRLVE HVSDYAGSGF DAEVFSANIF VFKR
|
|---|
| |