| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1994 |
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| Symbol | |
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| ID | 8377668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2290109 |
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| End bp | 2291740 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645001220 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003158498 |
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| Protein GI | 256829770 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.199074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTAA ACGACCTTTT GGATTTCTAC TCCCCTCGGC TTGAGGACAT GAGCGATCTG
GCATTGATCC TTGACCAGAC GGGCGCGGTG CTCTTTGCCA ACGAGGCGGT GCGCAAAATC
CAAAGCGCTC CGCCCAAGAG CCTTGCTCCA GAGGACATCA TCGAACAGTT GCAGAACCAA
GGCCGGGCCG GAGAATTCTC GAACCTGCCA GACAACACCC CGCCTGTGCG CGAGGCCCGG
TTACGCGTCA TTCTCCCCGA TGGCGCGGGG ACACGCCACG TGAACTGGAA ATTCGTCGGC
ATCCCGGCGA CTGACGGCGC GATTACGCTT GCATGGGGCA CCTTTCGTGC TACCGGCCCC
GGCCAGGAAA TGGGTTTCAC CGTCCTGCCA AACGGCATCA TCCAGGCCGC AAGCCCTGCC
TTGTGCAGCA TCTGCGGCTA CTCGCGGGAC GAACTTGTCG GCAGGCCCGC AAGACAATTC
TATTACACTG CCGCCTCGCG CAAGCGCATC GTCAATCAAT TGAATGAGCG CAACGAAGTC
GAAAACGGAG CGGTCACCCT GCGCTGCAAG GATGGCTCCC CGCTGACTCT CTGGTACAGC
GCCGAATCCA TACGGGGCAC AAGCGGGCGG CTTCTTGCCT ACAGCGGATT CTTCCAGCAA
CGCCCCTTCA CCTTTTCCTC CAAGCTGGCC GGGGAATTCA CGCGTATCGT CGACGCCCTC
CCCGACCTGG CCTGGGTCAG CGGACGGGAC TTGCGCATCG TCGCGGCCAA TCAGGCCTAT
CTGAGGGCCT ACAAACGCGA ACGCGCCGAA GTCATCGGTC AAAGCGAATA CGATTTTCTC
AATCCCGAAC AGGCGCGTTT TCCCATCGAG GCGGCTCTCA AGGTCTTTGA AGAAAAGCAG
GAGCTCCTGC ACCCCGCCGT GCCTCATCTG ACTGATCCGC AGGTCTGGTA CAGGGTCATC
CGCCGCCCCA TCTTCGACGA CGACCGCCAG GAGGTCATCG GTCTTCTGGG GATTGCCCAG
GATATTTCCG CCAAGGTCGT GCAGGAAAAC GCCTTCATGG AGCAACTGCG CGCCCGGGAG
GAGGATGTGG TCGTGGTCAC CGACGACCAG GGCCGCATTC TGCGCCGCTC GGCCCAAACG
TTGAACCCTT CGATATACGG ACGGCCACAA ACCTTTGACG CCTACACCCT CGACATGCGG
CCGGTACTCG ACCTCTTGCA TGCCGATGAT CTGCCCGCAG TGCGAAAGGC CATGCACCTT
GTCCTGCGCG AACGTCGTGA ACAGCACCTG GAATGCCGCA TCCGCAACCA GGCCGGAAAC
TACTCCACCG TCCTCGCCAG GTTGCTCTTT CACGATGCCA TATACGGCGA ACCTCGCATG
TACGTGGTCG TGCGCGACAT TACCGAACAG ATGGGCTTGC GCAAGGCGAC CATGGTCATC
GAACGGCTCA AGCTGGCCTC GGGCGCGCAC ACGGACCGGG AGCTGGCATC TTTTCTCAAT
GTATCCGCCG CAGCCATTTC CAACGCACGC AAAAACGAGA GAGTCCCTCC GGACTGGATC
ATCGACACCG GATTGCGCAC CGGCCGCTCC ATCGACTGGA TCGTCAGCGC GGTGGTGCCC
AATCAGGTCT GA
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| Protein sequence | MTVNDLLDFY SPRLEDMSDL ALILDQTGAV LFANEAVRKI QSAPPKSLAP EDIIEQLQNQ
GRAGEFSNLP DNTPPVREAR LRVILPDGAG TRHVNWKFVG IPATDGAITL AWGTFRATGP
GQEMGFTVLP NGIIQAASPA LCSICGYSRD ELVGRPARQF YYTAASRKRI VNQLNERNEV
ENGAVTLRCK DGSPLTLWYS AESIRGTSGR LLAYSGFFQQ RPFTFSSKLA GEFTRIVDAL
PDLAWVSGRD LRIVAANQAY LRAYKRERAE VIGQSEYDFL NPEQARFPIE AALKVFEEKQ
ELLHPAVPHL TDPQVWYRVI RRPIFDDDRQ EVIGLLGIAQ DISAKVVQEN AFMEQLRARE
EDVVVVTDDQ GRILRRSAQT LNPSIYGRPQ TFDAYTLDMR PVLDLLHADD LPAVRKAMHL
VLRERREQHL ECRIRNQAGN YSTVLARLLF HDAIYGEPRM YVVVRDITEQ MGLRKATMVI
ERLKLASGAH TDRELASFLN VSAAAISNAR KNERVPPDWI IDTGLRTGRS IDWIVSAVVP
NQV
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