Gene Dbac_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1774 
Symbol 
ID8377446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp2018315 
End bp2019337 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content65% 
IMG OID645001002 
Productprotein of unknown function DUF201 
Protein accessionYP_003158281 
Protein GI256829553 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01205] D-alanine--D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.119478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGTT TGCATGTGGC CGTGGTTCGT GAAAGCATCC CCGACGCCGC CTCTCCCGAC 
GCCCTCGACA CGGTGGCGCA GGCCCGCAGC GTGCGGGAGA GCCTGGCCCG GTGTGGCTGG 
CGCACGTCGG AGCACGTTCT CGGCTCCGAC CCGTCGGCCC TGGAGACCAG CCTTGCGCAT 
CGCAGGCCAA ACGTCATCTT CAACCTGGTC GAGTCCTGCC ACGGGCTGGC CAGCCTGGCC 
TGTCTGGCTC CGGCACTTTT TCGCAAGGCC GGTTTTCCCT TTACCGGCGC GGACGAGGGC 
AGCATGGCCC TGGCCGGAGA CAAGGCCTTG GCCAGACGCC TGCTGCATGC GGCCGGTCTG 
CCCGTTCCTC CCGGAGTGAC CATGGGAGAG CTGCAACGGG GTGTTTTCCC CGGCCCCGGT 
ACCTATATAA TCAAAGCGAG GTTCGAGGAC GCGTCCCTGG GGCTGGGTCC GGACTGCGTC 
GTGGATGTGC GGGAAGGTGC GGAATTACTG GCGGCCATGC GGGAATTCGC GCCGCGCATG 
GGCGGCGACT GCGTGGCCGA GGGGTATGTG CGAGGACGGG AATTCAATCT GGCCCTCTTG 
GCCGAGCCTG GCGGTGGAGT GCGCGACCTG CCTTTGGCCG AGATGGTTTT CGATTCCGCG 
ATGCCCGGGC CGGCCATCCT GCATTATGCG GCCAAGTGGG ACCAGGGCAG CGCGGACTAC 
GCCGCCTCGG TTCGCAGTTT CGATCTGGAC GGGGAAGAGG ATCTGGTCTT GGAAATGAAA 
CGGATCGGTC GTGCCTGCTG GGAGCTTTTC AACCTGGCCG GGTATGCGCG AATTGACTTT 
CGGGTCGCGG GTCCGGGCCA AATCTACGTC ATCGACGTCA ATCCGAACCC CTGCATTACG 
CCGGACGCGG GTTTCGCGGC CGCAGCCCAG CGCGCGGGTC TGGACCACGC GGCGCTGGTC 
CAAGAGATCG TGTTCGATGC CTTGGAACGT TCGGGAAAAA CGCAGGAAGG ACGCCATGTC 
TGA
 
Protein sequence
MTGLHVAVVR ESIPDAASPD ALDTVAQARS VRESLARCGW RTSEHVLGSD PSALETSLAH 
RRPNVIFNLV ESCHGLASLA CLAPALFRKA GFPFTGADEG SMALAGDKAL ARRLLHAAGL 
PVPPGVTMGE LQRGVFPGPG TYIIKARFED ASLGLGPDCV VDVREGAELL AAMREFAPRM 
GGDCVAEGYV RGREFNLALL AEPGGGVRDL PLAEMVFDSA MPGPAILHYA AKWDQGSADY 
AASVRSFDLD GEEDLVLEMK RIGRACWELF NLAGYARIDF RVAGPGQIYV IDVNPNPCIT 
PDAGFAAAAQ RAGLDHAALV QEIVFDALER SGKTQEGRHV