| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1537 |
|---|
| Symbol | |
|---|
| ID | 8377206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 1741437 |
|---|
| End bp | 1742261 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645000764 |
|---|
| Product | UbiA prenyltransferase |
|---|
| Protein accession | YP_003158046 |
|---|
| Protein GI | 256829318 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
|---|
| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.626554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGAA GCACGCTGGC ACTGACCCGG CCCGGGATTT CCCTGGCCGT CGGGCTGTCG
GCCCTGGCCG GGTATGCCTT GGCCGCCGGG GAGTTGTCCG GCGGCGGGCC GCTTTTTGCC
GGGACTTTTG TCTTGAGCGC GGCCGTTTCC GTGCTGAACC AGATTCAGGA GCGCGGGCGC
GATGCGCGCA TGGAGCGGAC AAAGGGACGC CCACTGGCCA GTGGAAGAAT GAGCGTGGGG
CAGGGGAGCC TGATCTTCGC CGTCCTGCTC ATGCTGTCCG CCTTGTCCCT TTGGGTTCAT
CTGTCCTGGT TTGTACTTCC TGTCCTGCTG ATGGTGGTTG GTCTCTACAA TGGACTCTAC
ACCCTCATGA AACCCGTGAC CGGCTGGGCC ATGATCCCCG GAGCGGCCTG CGGCGCATTG
CCGTTCTGGA TTGGCTGGCT GGCCGGCGGC GGAGGGCTTG TCGCCGTAAC GCCCGTGTAT
TTCTTTGCCC TTTATTTCGT CTGGCAAATG CCTCATTTCT GGATGCTGGC CGAAAGCAAT
GCCGCTGACT ACGCGGCCGC AGGGTTCCCG GTTCCAGCCA ACAGTTTTTC CGGTTTCTCC
CGCCAGGCAC TCCCCAGAAT ATGGGCCCTG GCCTTGGCCA TGCTCGGCGG CATGGCTCCG
CTCTTCGGCC TTGCGGTCGG CCCAGGCCAG GCCTACGCCC TAGCCACTGC TTGCCCGGCC
TACGCGTTGC TGGCGGTTTT CGCGCGGGCC AGGGTGCTGC GTTACGTCTC GGATGGCTTT
CTGGCCGGCG TGGTGCTTAT GATCGTGGCG GAGAGGTTGG GTTGA
|
|---|
| Protein sequence | MIRSTLALTR PGISLAVGLS ALAGYALAAG ELSGGGPLFA GTFVLSAAVS VLNQIQERGR
DARMERTKGR PLASGRMSVG QGSLIFAVLL MLSALSLWVH LSWFVLPVLL MVVGLYNGLY
TLMKPVTGWA MIPGAACGAL PFWIGWLAGG GGLVAVTPVY FFALYFVWQM PHFWMLAESN
AADYAAAGFP VPANSFSGFS RQALPRIWAL ALAMLGGMAP LFGLAVGPGQ AYALATACPA
YALLAVFARA RVLRYVSDGF LAGVVLMIVA ERLG
|
|---|
| |