Gene Dbac_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1228 
Symbol 
ID8376892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1356526 
End bp1358610 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content64% 
IMG OID645000460 
ProductOligopeptidase A 
Protein accessionYP_003157747 
Protein GI256829019 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.470047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAGC CAAATCCCCT GCGGAGCTGG GAACTGTGTC CCGATTTCCC TTCCATCACC 
GCCGATCATG TCATGCCGGC CATGCAGCAC GTCATTGCCA CAAGCAGCGC CGAACTCGAA
GCCCTCGAAC AGGCCGCGCC CCGTACCTGG CACGGTCTGC TGGTCCCTCT GGAGCGCCTG
ACCGACAGGG TTGCGCGCGC CTGGGGCGTG GCCACGCACC TGCATAACGT CAAGAACTGC
GACGCCATGC GTCAGGCCTA TGCGCAGGCA CAGCCCCTGG TCGTGGAATT TCACAACCGC
CTGGGGCAGA GCCGCCCCGT CTACGACGCG CTCCTCGCCC TGCGGGACAG CCCGGATTTT
TCCACGTTCA GCCAGGCCCT CCAGCGCACC ATCAGCCTGC TGATCCGCGA CGCGGCCCTG
CAGGGCGTTG GGCTTTCTCC CGAGGATCGC GAGCGCTTCA ACGCCATAAG CCAGGAGCTG
GCCGAGCTGT CCACCCGCTT CACCAACAAT GTTCTCGACG CGACCCAGGC CTATGCCCTG
ACCCTGACGC AAAAGGATGA AGTCGCAGGA CTCCCCGAAG ACTCGCTGCG CCTGGCCGCC
AGCATGGCCC GCGCGCGCGG GCAGGAGAAC GCCACGGCGG AAAACGGCCC CTGGTGCGTC
ACCCTTGACC TGCCCTCGTT CCTGTCCTTC ATGCAGCACG CCTCCCGGCG CGATCTGCGC
GAGAATGTCT ACCGGGCCTA CATAACCCGC GCCGCCAGCG GCGACACGGA CAACCTGCCC
CATATCCGGC GCATTCTGAA ACTGCGCCGG GAGCTGGCCG CGCTGCTTGG CTTTGAGAAT
TTCGCGGACG TAAGCCTTGA ACGCAAGATG GCCCCAAACG TGGACAGCAT CAAGACCCTG
CTGCGCACGA TCCAGGACGC GGCAACGGAC CAGGCCTTGA ACGACCTCAT TGAGCTGGGC
GAACTGGCCC GCGCGGCCGG ACAGTCCGAT GACATCCAGC CCTGGGACGT CATGTATTGG
GCCGAAAGGG TGAAGGAGCA GCGTTTCGGA CTGCGCGACG AGCTGATCCG CCCCTATTTT
CCTCTGCCGG CCATCCTCAA GGGTCTCTTC GATCTGATCG AGAACCTCTT CGCCGTCAGG
ATCGAAGCCG GCGCCGAGGT GCCGACCTGG CACGCGGATG TGACCTACTA CCGGGTCAAG
AACAGTGACG GCCTCGAAAT CGCTGGCTTT TATCTGGACC CCTACGCCCG CCCCGAAGAA
AAGCGCGGCG GCGCCTGGAT GGATGAACTT TACGGACGCA GCACGGTCTG CGCCCCACGC
GGTCATGCCG TGCGCCTGCC CATCGCCTAT GTGAACTGCA ATCAGCGCCC GGCCCTGGAC
GACGCGCCTT CGCTGATGAG TTTTCAGGAG GTGACCACGC TCTTCCACGA ATTCGGCCAT
GCCCTGCAGC ACATGCTGAC CACGGTGGAC CATGGCTTCG TGGCCGGAAT CTCCAATATC
GAATGGGATG CCGTGGAGCT GCCGAGTCAG TTCATGGAAA ACTGGTGTTA CCACCTTCAG
ACCCTGACCG GGCTGGCCCG CCATTACCGC ACAGGGGAAC CCATGGCCGC GGAACTTCTG
GACCAGCTCC TTGAGACCCG GACCTTCCGC GCCGGTTCCA ACGCCCTACG CCAGGTCTGC
TTCGCCCTGA CCGACCTGAC CCTGCACACG GCCGATCCGG ACACCCTTGA TCCCATGGAC
ACCGCCCAGC GCATCGCCCG CGAAATCCTG CCCCTGCCGC CACTGCCCGA GGACCGCTTC
CTGTGCTCCT TCTCGCACAT CTTTGCCGGC GGCTACGCGG CCGGGTATTA CAGCTACAAA
TGGGCCGAAG TCCTGAGCGC CGACGCTTTC GGCGCGTTTG TGGACGCCGG GCTTGAAGAT
CCGGCCCGCA GGCAGGATAC GGGCCTGCGC TTCCGGAACA CGGTCCTGGC CCTGGGCGGC
AGCCGACACC CCATGGACAT TTTTCGTCTC TTTCGAGGTC GCGAACCCGA CCCAAGGGCC
CTCCTGCGCC AGGAAGGCCT TTTGCCTACA AACAAGGATA ATTAG
 
Protein sequence
MHEPNPLRSW ELCPDFPSIT ADHVMPAMQH VIATSSAELE ALEQAAPRTW HGLLVPLERL 
TDRVARAWGV ATHLHNVKNC DAMRQAYAQA QPLVVEFHNR LGQSRPVYDA LLALRDSPDF
STFSQALQRT ISLLIRDAAL QGVGLSPEDR ERFNAISQEL AELSTRFTNN VLDATQAYAL
TLTQKDEVAG LPEDSLRLAA SMARARGQEN ATAENGPWCV TLDLPSFLSF MQHASRRDLR
ENVYRAYITR AASGDTDNLP HIRRILKLRR ELAALLGFEN FADVSLERKM APNVDSIKTL
LRTIQDAATD QALNDLIELG ELARAAGQSD DIQPWDVMYW AERVKEQRFG LRDELIRPYF
PLPAILKGLF DLIENLFAVR IEAGAEVPTW HADVTYYRVK NSDGLEIAGF YLDPYARPEE
KRGGAWMDEL YGRSTVCAPR GHAVRLPIAY VNCNQRPALD DAPSLMSFQE VTTLFHEFGH
ALQHMLTTVD HGFVAGISNI EWDAVELPSQ FMENWCYHLQ TLTGLARHYR TGEPMAAELL
DQLLETRTFR AGSNALRQVC FALTDLTLHT ADPDTLDPMD TAQRIAREIL PLPPLPEDRF
LCSFSHIFAG GYAAGYYSYK WAEVLSADAF GAFVDAGLED PARRQDTGLR FRNTVLALGG
SRHPMDIFRL FRGREPDPRA LLRQEGLLPT NKDN