Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1144 |
Symbol | |
ID | 8376808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1251015 |
End bp | 1251668 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645000377 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_003157664 |
Protein GI | 256828936 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACA AGGCAGTGGT TTTTGACATG GACGGAACTC TGCTCGACAC CCTGGCCGAC CTTGGCGACG CCATGAACCG TGTGCTTGAG CAGCACGGAT TCGCGCCCCA TCCCATAAAC GCCTACCGCC AGTTCGTAGG CAGCGGGGCG GGACAACTTG TGGCCCGCGC CCTGCCTGCG CATGAACAGC ATGAGGATTT GAAAAAACGG TGCCTGCAGG CCTTTTTGCG GGAATACGAG GCCGGATGGC GGATCAAGAC CTGTCTGTAT GAAGGCGTGC CAGAACTGCT TGACGCTCTT GCGGCCAGAA ACATCCCCAT GGCCGTGCTG ACCAACAAGC CGCAGGACTT TGCCGAGCTG TGCATGCGGG AATTCCTGTC GCGCTGGGAT TTCGCCCTGA CCGTGGGGCA GATGCCGGGC GTGCCGGTCA AGCCCGACCC GGCCGGGCCA CGGCAGGTCA TTCGCCATCT GGGCGTGCAG CCGGATGAGA TCCTCTATCT TGGCGACACG GACGTGGACA TGTTCACGGC CGTCAATGCC GGGATGCATC CCGTGGGAGT GCTGTGGGGG TTTCGACCGG AGCAGGAACT GCTTGAGTCC GGCGCGGCGG CGACGCTGGC CCACCCCATG GAACTGTTGC GCTTTCTGGA TTGA
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Protein sequence | MKYKAVVFDM DGTLLDTLAD LGDAMNRVLE QHGFAPHPIN AYRQFVGSGA GQLVARALPA HEQHEDLKKR CLQAFLREYE AGWRIKTCLY EGVPELLDAL AARNIPMAVL TNKPQDFAEL CMREFLSRWD FALTVGQMPG VPVKPDPAGP RQVIRHLGVQ PDEILYLGDT DVDMFTAVNA GMHPVGVLWG FRPEQELLES GAAATLAHPM ELLRFLD
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