Gene Dbac_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0203 
Symbol 
ID8375839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp239777 
End bp240421 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID644999433 
ProductSNARE associated Golgi protein 
Protein accessionYP_003156746 
Protein GI256828018 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACG ATTCCTCCAC CTCCGCTCCA ACCGATCTGG CCCAGGCCCG CGCCACGCGC 
AACCCTTTGC GAAAGCTCTA TTACTGGGTC CTGCATTGGG CTGCCACGCC CTATGCCCTG 
CCCGCCCTGG TGGTTTTGTC CTTTGCCGAG AGCTCTTTTT TTCCGGTGCC GCCCGACGTG 
CTGCTCATCG CCTTGTGCTT TTCGACGCCC GCGCGTTGGT TCAAGCTGGC CGCCTGGTGC 
ACCGCGGCCT CGGTTGTGGG CGGACTGCTT GGCTATTTCA TTGGTTGGGG TCTGTGGGAG 
ACGGTGGGGC AGCCCATCGT ACGGATGTAT CATGGCGAGG CCGTGGTGGA GATGGTCCGC 
GTCTGGTACG AAAATTACGG ATTTTTCGGC GTGCTGGTCG CGGCGGTGAC GCCCATTCCC 
TACAAGGTCT TCACCATCGC TTCCGGCATG ATGAGTTTTG ATTTGGCACA GTTCGTCCTG 
GCCTCGGTGC TGGGCAGGGC GATGCGCTTT TTCCTGGTGG CCGGCCTCAT CCGCCTCTAT 
GGGGCGCGCA TCAAGCCCTT TATGGAACGG CATTTCGAGC TGGCCGCTTC GGCCCTGGTT 
GTCCTGGCCA TTCTCGGGTT CATGGCCATC AAATACCTGA AATAG
 
Protein sequence
MKHDSSTSAP TDLAQARATR NPLRKLYYWV LHWAATPYAL PALVVLSFAE SSFFPVPPDV 
LLIALCFSTP ARWFKLAAWC TAASVVGGLL GYFIGWGLWE TVGQPIVRMY HGEAVVEMVR 
VWYENYGFFG VLVAAVTPIP YKVFTIASGM MSFDLAQFVL ASVLGRAMRF FLVAGLIRLY 
GARIKPFMER HFELAASALV VLAILGFMAI KYLK