Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0064 |
Symbol | glyA |
ID | 8375697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 86890 |
End bp | 88128 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644999294 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_003156610 |
Protein GI | 256827882 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAAC TCACCCGCCA GGATCCGCAG ATCGCCAAAG CGATCCAGCT GGAGACCAAC CGCCAGATCA CCAAACTCGA ACTCATCGCC TCGGAGAACT TCACCTCCCT TGCGGTCCGC GCCGCCATGG GCAGCGTCAT GACCCACAAA TACGCCGAAG GCTATCCGGG CAAACGCTAT TACGGCGGCT GCGAGTTCGT GGACATGGCC GAAAACCTGG CCATGGAGCG GGCCCGCCAG CTCTTTAACG CCGAATACGC CAACGTTCAG CCCCACTCCG GTTCCCAGGC CAACATGGGC GCGTATTTCG CGGCCATCCA GCCCGGCGAC ACCATCCTCG GCATGAATCT GTCCCATGGC GGTCACCTGA CCCATGGCAG CCCGGTCAAT TTTTCAGGAC GCCTGTTCAA GACCGCCTTT TACGGGGTCG AGAAGGAAAC CGGCCAGATC AACTATGACG AAGTCGAAGC CCTGGCCCTG GAACACAAGC CCCAGATGAT CATCGCCGGG GCCAGCGCCT ACCCGCGCAC CCTCGATTTC GCCCGTTTCC GGGCCATCGC CGACAAGGTG GGGGCCAAAC TGCTGGTGGA CATGGCGCAC ATCGCGGGCC TGGTGGCCAC GGGCCTGCAC CCCTCGCCCA TCGAGCACGC CCACTTCACC ACCACGACCA CGCACAAGAC CCTGCGCGGT CCTCGCGGCG GCATGATCCT GAGCACCGAG GAATTCGGCA AGACCCTCAA CTCCCAGATC TTCCCCGGCA TCCAGGGCGG ACCGCTCATG CACGTCATCG CGGCCAAAGC CGTGGCCTTT GCCGAGGCGC TGCGCCCGGA ATTCAAGGAT TATCAGCAGC AGGTCGTCGC CAACGCCCAG ACTCTGGCGG CCGAACTGAC GGCAGCCGGG TACCATCTGG TCTCCGGCGG CACGGACAAC CATCTCATGC TGGTGGACCT GACTGCCCAG GACATCACCG GCAAGGACGC CGAGATCGGC CTCGACAAGG GCGGCATCAC CGTCAACAAG AACACCGTGC CCTTCGAGAC CCGCTCCCCC TTCGTCACCT CCGGGGTGCG CCTGGGCACG CCGGCCTTGA CCACGCGCGG CATGAAGAGC GACGACATGC GCAAGGTTGC CAAATGGATT GTCGCCATCC TGGAAAACCT GGACAATGAG TCCAGACTGA CCGAGATTCG GCTGGAAGTG GAGAAATTCG CGGGCCAGTT CCCGCTTTTC GCCTGGTAG
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Protein sequence | MDELTRQDPQ IAKAIQLETN RQITKLELIA SENFTSLAVR AAMGSVMTHK YAEGYPGKRY YGGCEFVDMA ENLAMERARQ LFNAEYANVQ PHSGSQANMG AYFAAIQPGD TILGMNLSHG GHLTHGSPVN FSGRLFKTAF YGVEKETGQI NYDEVEALAL EHKPQMIIAG ASAYPRTLDF ARFRAIADKV GAKLLVDMAH IAGLVATGLH PSPIEHAHFT TTTTHKTLRG PRGGMILSTE EFGKTLNSQI FPGIQGGPLM HVIAAKAVAF AEALRPEFKD YQQQVVANAQ TLAAELTAAG YHLVSGGTDN HLMLVDLTAQ DITGKDAEIG LDKGGITVNK NTVPFETRSP FVTSGVRLGT PALTTRGMKS DDMRKVAKWI VAILENLDNE SRLTEIRLEV EKFAGQFPLF AW
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