| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1987 |
|---|
| Symbol | |
|---|
| ID | 6026430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 2090576 |
|---|
| End bp | 2091535 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641594808 |
|---|
| Product | selenide, water dikinase |
|---|
| Protein accession | YP_001718110 |
|---|
| Protein GI | 169832128 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0709] Selenophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00476] selenium donor protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTGCGCT GCCTGCCGCC CCTGGTTGAT CCCCGCATCC TGGCCGGCCG GGAGGATGAC
GCCGCCGTGT ACCGGGTCGG CCCCGACTTG GCCCTGATCC AGACCGTGGA CTACATCACT
CCGGTGGTCG ATGATCCGTA CACCTTCGGG CAGGTGGCGG CCGCCAACGC CTTAAGCGAC
ATCTACGCGA TGGGCGGCCG TCCGGTGTTC GCTCTCAATA TCGTGGGGTT CCCCAACCAG
AGCATTCCCC TTGGGATCCT GGAAGACATT TTGCGCGGTG GTGCGGACAA GGCGGCCGAG
GCCGGTGTAT CCATCGCCGG GGGCCATTCC ATCACCGATC ATGCCCCCAA GTACGGCTTA
TGTGTTACGG GGTTCGCTCA CCCCGAACGC CTCGTGTTCC GAAGCGGTGC GCGGGCCGGT
GATGTCCTGG TCCTCACCAA GCCGCTGGGC ACCGGTGTTA TCGCCACCGG CATCGACCGG
CGGCTGGTGG ATGCCGGCCT GGAGACCCTG GCGGTGCGGT ACATGACCGC GCTTAACCGG
GAGGCGGCCG AAGTCATGCT GCGGATCGGC GTGCACGCCT GTACGGACGT GACCGGATTC
GGGCTTTTGG GGCACCTGTG GGAAATGGCG GCGGCGAGCG GGGTGGGGGT CGAGGTGGAG
GCCTCCCGGG TCCCGGTGAT TCCCGGTGCT TTGGAACTGG CACGGGCCGG GGCGGTGGCC
GGCGGGGCCC ACGGCAACTA TCGTTACGCC CGCGAGCGCT ACCGGTGGGA GCCTTCGCTT
TCCGAGGAAA TGCGGCTGGT CTTGTGCGAT CCCCAGACTT CCGGCGGGCT GCTCATGGCG
GTCGCGCCGG ACAAACTGGA TGCGCTCCTG GCCGCCTTGC GCGGTGCTGC AGGGGCCGAG
GAGTCCGCCG TGATCGGCAG ACTGGTACGA GATCCAAGCT CGTTCAATGT GTTTTCCTAG
|
|---|
| Protein sequence | MLRCLPPLVD PRILAGREDD AAVYRVGPDL ALIQTVDYIT PVVDDPYTFG QVAAANALSD
IYAMGGRPVF ALNIVGFPNQ SIPLGILEDI LRGGADKAAE AGVSIAGGHS ITDHAPKYGL
CVTGFAHPER LVFRSGARAG DVLVLTKPLG TGVIATGIDR RLVDAGLETL AVRYMTALNR
EAAEVMLRIG VHACTDVTGF GLLGHLWEMA AASGVGVEVE ASRVPVIPGA LELARAGAVA
GGAHGNYRYA RERYRWEPSL SEEMRLVLCD PQTSGGLLMA VAPDKLDALL AALRGAAGAE
ESAVIGRLVR DPSSFNVFS
|
|---|
| |