Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1823 |
Symbol | |
ID | 6026698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1927051 |
End bp | 1928874 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641594640 |
Product | CRISPR-associated RAMP Crm2 family protein |
Protein accession | YP_001717951 |
Protein GI | 169831969 |
COG category | [R] General function prediction only |
COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
TIGRFAM ID | [TIGR02577] CRISPR-associated protein, Crm2 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGA TGCACCTTGT CGTTTTTCAC ATTGGACCGG TTCAGGATTT CATCGCTACC GCGCGGCGCA GTCGCGATCT TTGGTTTGGC TCGTGGTTGT TGAGTGAACT GGCAAAGGCC GCCGCGCTGG AAATCGTGCA GCAGAATGGG AACGATATTT CCTGCCTTGT GTTTCCAGCC CCTGATAAGT TAGAGCAGTT GAAGTCTTTC GACTTCAACG CGCCCAACAA AGTCGTAGCC CGGGTAAGGT GCGATCCGGC GGAATTGCGC GAGTCCGTCC GGGAAGCCAT ACTCAGGCGC CTTTGCGAAA TTTGTGATGA TGCCTACAAA AAGATTAAGG GCGGGTTTGA TCGTGAAATT GCTAAGCGGC AGGTGGAAGA CTTTCCTGAG TTCTTCTGGG CTTCCTACCC CTTTAACGGT AACTACAAAC AGGCGCGTGA CTTCGCCGAA GCCCTCCTGA ACGCCCGGAA GGTGACGCGC AACTTCGCGC CCATTACGTG GGGAAGCCCC GCTCCCAAAT GTTCTCTCGA CGGGTGCCGG GAGTCGGTCA TTACCGGGAG TGTATACAGT CGGATGAATG AAAGCCAGCT TTATGAAAAT TACCGCGTGC AGCGTGGCGA GTATCTGTGC GGGGTATGTT TATTAAAACG TCACGGGAGG CGCGGATCAG AGGAGTATTT TTTCAGTACT TCCCACGTGG CTGCTCTCCC TTTGCTGGAA AGGCTCACCA ACCAGCACCA GCCTCTTGTG GATGCATACA TCGGAAAATT GAAGGAACTT GGCATCACGG CGGATGCCCT GCAAACGGTG TGGCTGCATC ATCCCGTATT TGGTCCCCAT GACGGCCAGT TGTTATTTGA AGAGCGCCTG CGCGAATTTT TCAAAGAAGA AGAAGAAGGG AAACTGTTGC AAGCCAAAGA GGCGCTGCGC ACTTTCCTAA AACAAGCCTT TGACAGCAAA AAGCCGCTTC CTTATTACAC GCTTCTCCTC GCCGACGGTG ATCACGTGGG TAAAGTTATT GATACCCAGG AAACTCCCGA AAAGCACCAA GAACTTTCCC GTTCTCAGAG CCGCTTTGCC CTAGAGGTCC GAGATATAGT ACAGCACCAC CAGGGTTCGC TTTTATATTC CGGTGGCGAT GATGTGCTGG CTCTTGTGCC CCTGCACACG GTGCTGGCGT GCGCCCGTAG CCTGGCTGAG ACGTTCCGCC AGCGGTTTGC TGGTTTTAAA GCAGAAGATG GCGGAAAGGA AATATCCCTT ACCCTTTCGG TCGGCATTGC TGTTGTCCAC CATCTTGATC CCCTCTCTGA TGCCCTTGAG TTGGCGCGGC GAGCGGAAAA AGCCGCTAAA TCCGTAGGTG GCAAAAACGC CTTGGCGGTA ACGCTCAGCA AACGAGGTGG GGTGGAGCGG ACCGTTAAAG ATACGTGGGG CGTCCTGGAC CGGCGGCTGG AACGGTTCAT TGACCTGCAT CGAGCCGAAG CCGTACCTGA TGGAGCCGCT TACGAACTAC GCGACCTGGC CAGGCAGCTC GAGGCGTCAG ATGAAAATTT AAAGAGTACG CTTCAAAAAG CAGCGTACGC AGAGGCTAAG CGTATTTTGC GCCGCAAGAA GGCCCGGCGT GGTACTGAGC CAATAGCGGA AGATATTCTC AGTGAGCTAG AGGTTTTCCT TGACAAGGAT AGGTTTTCTT TCGAAAAACT TAAGCAACTG GCTGACGAAC TCATCATTGC CCGAGAATTT GCTGCCGCCA TGGATCTGAC TAATATACCC CTGCCTGTAC CCTCAACCGG CGAGGTGATA AAAAATGACC GTCTGGATCA TTGA
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Protein sequence | MAEMHLVVFH IGPVQDFIAT ARRSRDLWFG SWLLSELAKA AALEIVQQNG NDISCLVFPA PDKLEQLKSF DFNAPNKVVA RVRCDPAELR ESVREAILRR LCEICDDAYK KIKGGFDREI AKRQVEDFPE FFWASYPFNG NYKQARDFAE ALLNARKVTR NFAPITWGSP APKCSLDGCR ESVITGSVYS RMNESQLYEN YRVQRGEYLC GVCLLKRHGR RGSEEYFFST SHVAALPLLE RLTNQHQPLV DAYIGKLKEL GITADALQTV WLHHPVFGPH DGQLLFEERL REFFKEEEEG KLLQAKEALR TFLKQAFDSK KPLPYYTLLL ADGDHVGKVI DTQETPEKHQ ELSRSQSRFA LEVRDIVQHH QGSLLYSGGD DVLALVPLHT VLACARSLAE TFRQRFAGFK AEDGGKEISL TLSVGIAVVH HLDPLSDALE LARRAEKAAK SVGGKNALAV TLSKRGGVER TVKDTWGVLD RRLERFIDLH RAEAVPDGAA YELRDLARQL EASDENLKST LQKAAYAEAK RILRRKKARR GTEPIAEDIL SELEVFLDKD RFSFEKLKQL ADELIIAREF AAAMDLTNIP LPVPSTGEVI KNDRLDH
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