| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1403 |
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| Symbol | |
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| ID | 6026598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1487213 |
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| End bp | 1489849 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641594224 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001717544 |
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| Protein GI | 169831562 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGT TTCTTGTTAT TGATGGGAAT AGCCTTTTGC ACCGGGCCTA CCACGCTATT
CCACCGCTTA CTACCTCCGG CGGCCTGCCC ACCAACGCCG TGTATGGTTT CACCAACATG
CTTTTGCGGG TCATCACCGA GGAGCAGCCG GATATGATCG CGGTGGCCTT CGATAAGGGC
CGGATCACTT TTCGCCACGA CACCTTCCAG GAATACAAGG CGCAGCGTCC CCCGATGCCG
GACGATTTGC GCCCCCAGTT ACCCATACTC AAGGACGTGC TCGGGGCCTT GCGGATCTCG
ATCCACGAAG CCGAGGGTTA CGAGGCCGAC GACATCATCG GCACCCTGGT CCGAGTGGCC
AGCGAGAACG GGCACGACTC CCTGATCCTG ACCGGGGACA AAGACATCCT GCAGCTGGTC
GGACCCCACA CCCAGGCCCT GCTTACCCGC AAGGGCATCA CGGAGCTGGA ACGGTACGAT
ATGGCCAAGA CGCGGGAACG CTTCGGGATC ACTCCGGCAC AGTTGGCCGA TCTGAAGGGC
TTGGTCGGCG ACCCTTCCGA CAATATCCCC GGTGTGCCGG GCATCGGCCC AAAGATAGCC
GCGAGACTGC TCGCTGACCA CGGCCGGCTG GAGTCGGTGT TGGAAAACCT GGACGGGCTC
CCCCCCCGCG TCCGGCAGCA ACTGGAGAAC TTCGGCGACC AGGCCCGGAT GTCCAAAAAG
CTGGCGACTA TTGACACCGG GGTCCCCGGA CTGGGAAAAG AAGACCTCAA GGTCTGGCCG
GGCCCGGACA AGCCGGCCTT GCTGGAGATT TTCAACAAGC TGGAGTTCCG GAGCCTGGTG
CGCCGAATCA CCGAGGCCCC CGTCACCGGC GGTGTTCCCG CCGGGAAGCC GGTGGAGGCG
TTCAGCCCCG ACTATCGGCT CCTGGACGGA CCCGACCACC TGGAGACCCT GCTCGATCAG
GCCCGCCGGG CCGGCGCGGT GGCTGTCGCC TACGCACGCG GCCGAAGCGG CATCGAGGCA
CTGGGCTTCA GCGTGGAAGC AGGAAACTAC CTTTTGCCTT TGGGCGCAGC CGACCTGGAG
ATCCTGGCGG GCGTGCGCAG GCTCTTCGCC GACGCGGCGG TGGCCAAGCA CATGCACAAC
GCCAAGGACT TCTTGCGCTG GGCCCCGGAT TTTGATCTCG CAAATATCTG CTTTGACAGT
ATGGTGGCCG CTTACCTGGT AAACCCTCTG GCGGCCAACC AACAACTGGA GGATGTGGTC
CACCAGTATC TGAACCTGGT GTTGGTCCCT GACGGTCCCG CCGCCCCGGC GACCGCCGCG
GACTGCATCC GGAGGCTTTA TCCGGTTCTG CGGGCCGAGT TGCGCGGGTA TGAACTCGAT
TACCTCTTTG ACCGGGTCGA ACTGCCGCTG ACCCGGGTGC TGGCGGACAT GGAACTGGCC
GGTGTGGCCG TGGACCGGGA CCAGCTCGAG GCGCTGTCGG AGGAGTTCGG TACCCGGGCC
GGGGAACTCG CCGCCCGGAT TTGCACCCTG GCCGGGGAGG ACTTCAATCT CAATTCCCCC
CGCCAGTTGG GCTACATCCT GTTTGAAAAG TTGGGGCTTC CGGCCGGCAA GAAAACCAAG
ACCGGCTACT CCACCGACGC CGGAGTGCTG CTGGACCTGG CTGAAAAGCA TGAAATCGCC
GCCCTGCTCT TGGAGTACCG CCAGCTGATC AAGCTTAAAA CCACCTACGC CGACGGACTG
GCCGCCCTGG TGGACCCCGC GACTGGGCGG CTGCATACCA CCCTACACCA GACGGTGACC
AACACGGGAA GATTGTCGTC GGCCGAGCCG AACCTTCAGA ACATCCCAAT CCGGATGGAG
GAGGGCCGGC GGATCCGCAA GGTGTTCATC CCGCGCGACC CGGCCCGCGT GCTCCTGACC
GCGGACTATT CCCAGATCGA GCTGCGCATT CTGGCTCACC TTTCGGGGGA CCCGGCACTG
ATCACCGCTT TCCGGGATGA ACAGGACATC CACGCCCGGA CGGCCGCCGA GGTCTTCGGC
GTGCCGCTGG AGATGGTCAC CCCGGAGATG CGAAGCCGGG CCAAAGCGGT CAATTTCGGC
ATCATCTACG GGATCAGCGA TTTCGGGCTG GCCCGGGATC TAAAGGTGAC CCGGGCGGAA
GCCAGGGAGT ACATCCAGAG GTATTTCGCC CGCCTGCCCG GGGTAAAGGA ATACATAGAC
ACCGCAATCC GTTCGGCCCG GGAGCGCGGC TACGTGACCA CGGCCTTGAA CCGCCGCCGG
CCTCTTCCCG AGTTGTTCAG CGCCAACCAC ACCGTGCGGA GCTTCGGAGA ACGGGCCGCG
GTCAACACGC CGATTCAGGG CACCGCGGCC GACATCATCA AGCTGGCCAT GGTGAAGATC
CACGCCCGAA TGCGGGAGCG GAACCTGAAA ACGCTGATGA TTTTGCAGGT ACACGACGAA
CTGCTTTTCG ACGTGCCGGC GGAGGAAGTG TGTACGGTGG CCCCGCTCGT CAAAGCCGAA
ATGGAAACCG TGCTGCCGCT GAACGTGCCC CTGACTGTTG ATCTGAAAAT CGGACACAAC
TGGTATGAAG TACGGAAAAT GGACGAGGTG ACCCAATGCC TGAACTTCCT GAAGTAG
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| Protein sequence | MAKFLVIDGN SLLHRAYHAI PPLTTSGGLP TNAVYGFTNM LLRVITEEQP DMIAVAFDKG
RITFRHDTFQ EYKAQRPPMP DDLRPQLPIL KDVLGALRIS IHEAEGYEAD DIIGTLVRVA
SENGHDSLIL TGDKDILQLV GPHTQALLTR KGITELERYD MAKTRERFGI TPAQLADLKG
LVGDPSDNIP GVPGIGPKIA ARLLADHGRL ESVLENLDGL PPRVRQQLEN FGDQARMSKK
LATIDTGVPG LGKEDLKVWP GPDKPALLEI FNKLEFRSLV RRITEAPVTG GVPAGKPVEA
FSPDYRLLDG PDHLETLLDQ ARRAGAVAVA YARGRSGIEA LGFSVEAGNY LLPLGAADLE
ILAGVRRLFA DAAVAKHMHN AKDFLRWAPD FDLANICFDS MVAAYLVNPL AANQQLEDVV
HQYLNLVLVP DGPAAPATAA DCIRRLYPVL RAELRGYELD YLFDRVELPL TRVLADMELA
GVAVDRDQLE ALSEEFGTRA GELAARICTL AGEDFNLNSP RQLGYILFEK LGLPAGKKTK
TGYSTDAGVL LDLAEKHEIA ALLLEYRQLI KLKTTYADGL AALVDPATGR LHTTLHQTVT
NTGRLSSAEP NLQNIPIRME EGRRIRKVFI PRDPARVLLT ADYSQIELRI LAHLSGDPAL
ITAFRDEQDI HARTAAEVFG VPLEMVTPEM RSRAKAVNFG IIYGISDFGL ARDLKVTRAE
AREYIQRYFA RLPGVKEYID TAIRSARERG YVTTALNRRR PLPELFSANH TVRSFGERAA
VNTPIQGTAA DIIKLAMVKI HARMRERNLK TLMILQVHDE LLFDVPAEEV CTVAPLVKAE
METVLPLNVP LTVDLKIGHN WYEVRKMDEV TQCLNFLK
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