| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1325 |
|---|
| Symbol | |
|---|
| ID | 6026702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1401835 |
|---|
| End bp | 1402368 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641594141 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001717467 |
|---|
| Protein GI | 169831485 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTCTGA AAGAAAAAAG GTTGGCTTCC GAGTATGTTT TTCGCGGCAA GATCCTGCGC
GTTCGGGTGG ACACGGTGCT GCTGCCGGAT GGCCGCACCG GATCCCGCGA GGTGGTGGAA
TACGCGGGCG CGGTGGCCGT TGTCGCGCTG GACGCCCTCG GTCGGGTGGT GCTGGTGCGC
CAGTACCGTT ACCCCGTGGG AGAAGAGTTG CTTGAAATCC CGGCGGGGAA GCTGGAGGCC
GGAGAGGACC CGCTGGCCTG CGCCCGGCGG GAACTGCTGG AGGAAACCGG TTTCGCGGCC
CGGGATTGGC GTCTGGTGTG CAGCTACTAC TCCACGCCGG GCTTCACCAG TGAGCGGATG
TATGTGTTTC TGGCTACAGA GCTCAAAGCC AAAGAAGTGT CCGCGGACGC AGACGAGTTC
ATCGAGGTGG AGCTTGTCCC GCTGGAAGAG GCGCTGGCAA TGATCAGCGA GGGTACGATC
CGGGACGGCA AGTCACTAGT GGGATTGCTG ACGGTGGCGC GGGAAATGGG CTGA
|
|---|
| Protein sequence | MSLKEKRLAS EYVFRGKILR VRVDTVLLPD GRTGSREVVE YAGAVAVVAL DALGRVVLVR
QYRYPVGEEL LEIPAGKLEA GEDPLACARR ELLEETGFAA RDWRLVCSYY STPGFTSERM
YVFLATELKA KEVSADADEF IEVELVPLEE ALAMISEGTI RDGKSLVGLL TVAREMG
|
|---|
| |