Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1206 |
Symbol | |
ID | 6026337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1261472 |
End bp | 1262203 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641594021 |
Product | ABC-2 type transporter |
Protein accession | YP_001717349 |
Protein GI | 169831367 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAGCT ACACGGTGTT TTGGCGCGAG ATGCTGGTTT TTAAGCGTAC TTTTTGGAAG TTCCTCGCCT CGAGGTTGGT CAGCCCCGTC CTGTACCTGG TGGCCTTTGG CTGGGGCCTA GGCCGGAGCA TCCATACCGA CGGGGGGTCT TACCTGGATT TCGTCGTCCC GGGGATCATC GCCCTCAGCG CGATGACGGT GAGCTTCAAT GCCACCGGGG TCTCGCTCAA TATGAGCCGT CTTTACCACA AGACGCTGGA GGAATATCTT ATCGCGCCCA TCAGCAGCCT TTCCTTTGTC CTGGGCAAGG TGCTGGCCGG GATGGTACGG GGGCTGGTCG GCGCGCTGGT GATCCTGGGT CTCGGCACCC TTTTCGGTGC CCATCCGGTT ATGGGACCGT GGTTTTTTGC CGTCATATTT CTTACCTGTT TCCTGTTCGC CGCATTGGGC GTCGTGGCGG CCATGACCGT CCCTTCACAC GAGGACATGG CCAACTTTAG TACCTTTGTG ATTCTGCCCA TGGCCTTTCT GTGCGGCACC TTTTTCCGAA CGGAACACTT GCCGGGCATC ATGGCCGATG CGGTCTATGC CCTGCCGCTG ACTCACACCA GTTACGCCCT GCGCTCCCTG GCTGGCGGCG CGGGTTTGCC GGTTTCCTCC CTGCTCATCT TGGTTGCCTA CGCCACGGTC TTTTTCTCAG CGGCGGTGTG GGTTACCCGC CGGATACGGT AG
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Protein sequence | MDSYTVFWRE MLVFKRTFWK FLASRLVSPV LYLVAFGWGL GRSIHTDGGS YLDFVVPGII ALSAMTVSFN ATGVSLNMSR LYHKTLEEYL IAPISSLSFV LGKVLAGMVR GLVGALVILG LGTLFGAHPV MGPWFFAVIF LTCFLFAALG VVAAMTVPSH EDMANFSTFV ILPMAFLCGT FFRTEHLPGI MADAVYALPL THTSYALRSL AGGAGLPVSS LLILVAYATV FFSAAVWVTR RIR
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