| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1182 |
|---|
| Symbol | |
|---|
| ID | 6026388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1237353 |
|---|
| End bp | 1238447 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641593997 |
|---|
| Product | prephenate dehydrogenase |
|---|
| Protein accession | YP_001717325 |
|---|
| Protein GI | 169831343 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTAATC AGGTGACCAT TATCGGGGTG GGCCTTATCG GGGGCTCCAT CGGCCTGGGT
TTGCGGGCCC GGGGGCTGGC CCGCACCGTG ACCGGTGTCG GCCGCGACCC ATCGCGCCTC
CAGGAGGCGC TTGAGCGGGG CGCGGTCGAC CGTTTCACCA CCGATCCGCA AACCGGCCTG
GCCGGGGCGG AACTGGTGGT CATCGCCGTT CCCGTGGGCA GTATCATTCC GGTGTTGCGC
TCCGTGGTCC CGCACTTACG GCCGGGAACC ATTGTGACGG ATGTGGGCAG CTGCAAGGCG
GCAGTTGTGG CCGCCGCCGA AGAGGTCACC CCCACCGGGG TGCACTTTGT AGGCGGGCAC
CCCATGGCCG GCTCGGAGCA GGCAGGGATC GGCGGTGCCG ACCGCTACCT GTTTGAGGGC
GCATACTACG TGCTCACCCC CACTCCCAAT ACCGAAAGGC GGGCGTTGGA CCGGGTGCGG
GCCATGGCCG AGGGGCTGGG GTGTCGGGTG ATCGAAATGG AGCCGCAGGA ACACGACCGG
GCCGTGGCCG CCGTCAGTCA CCTGCCGCAT CTGCTGGCCT GCACCCTGGT GAACACGGTG
GCCGGGATGG AAGGCTCGGA ACGGGCGCTG GCGCTGGCGG CCGGCGGTTA CCGGGATACC
ACCCGGGTAG CGGCCGGCAA TCCCGAGATG TGGCTCGACA TATTTCTTGC CAACCGCCGG
ATGCTGAAGG CTCTGCTGGA CCGGTTCCGT TCGGAACTGA ACACGATTGA AGACGCCCTG
GAAGAGGGCG AGCCGGAAAG AATCACGGCT TGGCTGGAGG CGGCGCGGCG GAGCAGGGAG
GGCCTGCCAG CCCGGATGAA GGGCTACCTC AAGGACCTCC ACGAAGTCAC CATTACCATT
TCCGACCGCC CGGGAACCAT CGCCGCAGTG GCCTCGATCC TGGGCCGGCA CGAAATAAAC
ATTTCCGACC TGGAAATTCT TCGGGTGCGG GAAGGCGAGG GCGGGACCGT CCGCCTGGCT
TTCGGCACTG AACATGACCG GGACCGAGCC GCAGAACTGC TGGCCCGCGA AGGGATCCCG
GTGACCAAAC GCTGA
|
|---|
| Protein sequence | MFNQVTIIGV GLIGGSIGLG LRARGLARTV TGVGRDPSRL QEALERGAVD RFTTDPQTGL
AGAELVVIAV PVGSIIPVLR SVVPHLRPGT IVTDVGSCKA AVVAAAEEVT PTGVHFVGGH
PMAGSEQAGI GGADRYLFEG AYYVLTPTPN TERRALDRVR AMAEGLGCRV IEMEPQEHDR
AVAAVSHLPH LLACTLVNTV AGMEGSERAL ALAAGGYRDT TRVAAGNPEM WLDIFLANRR
MLKALLDRFR SELNTIEDAL EEGEPERITA WLEAARRSRE GLPARMKGYL KDLHEVTITI
SDRPGTIAAV ASILGRHEIN ISDLEILRVR EGEGGTVRLA FGTEHDRDRA AELLAREGIP
VTKR
|
|---|
| |