| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0776 |
|---|
| Symbol | |
|---|
| ID | 6025795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 805469 |
|---|
| End bp | 805840 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641593593 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001716930 |
|---|
| Protein GI | 169830948 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1395] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000212762 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGTT TCGGCGAGAC CTTGAAGCGG TTGCGGCACA GGATGGGCCT TCGGCAGAAC
GACGTGGCGG GAATGCTCGG AGTGGAACGT TCGACCGTTG CCAACTGGGA GCGCGGGGTG
AAGCAGCCGA GTCTCGACAC CCTGATAAAA CTCAGCGAGA CCTTCGGCGT CTCGCTGGAC
GAGTTAGTGG GAGCCGCCCA GCCCACTGCT CCCCTCCCCC CGGCGTACTA CCAGGTTTTG
GCCTCTGATC CCCTCGTAGT GCTTCTGGCC AAACGGACGA GCGTCCCGGC AAAAACCATT
GCCGCCTTCA TCGCAGCGTT CCAGATACCA GAGAGCAACT GCGGAAAGTG CCGGCAGTCC
AAGAAACTCT GA
|
|---|
| Protein sequence | MNRFGETLKR LRHRMGLRQN DVAGMLGVER STVANWERGV KQPSLDTLIK LSETFGVSLD
ELVGAAQPTA PLPPAYYQVL ASDPLVVLLA KRTSVPAKTI AAFIAAFQIP ESNCGKCRQS
KKL
|
|---|
| |