| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0053 |
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| Symbol | |
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| ID | 6027679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 58974 |
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| End bp | 60611 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641592907 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001716254 |
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| Protein GI | 169830272 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.60632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGAGTC AACAAGAACT AAAGGTCCGG ATCGTCTGCC AGGAAGAGAC CGTACGGCAG
GTCATTGGAG AACAGACGGT ACAGACCGTG GTCCGCGGCA AGATCACCAT TCCCAAGCAG
AAGCCGAAGG CTGAACAAAT TCTAGCCGTC CGGGCTCGGG TCGAGGAACA AGAGATGGAA
ATCATCCCTG ACAAGGTCAT CGTCCAGGGG AAGATTGTCT TCAACGTGAC CTACGTCGCG
GACTTTCCGA CCCAGCCGGT GCACCACGTA CGCGGCCAGC TCGAATTCGC AGAATCTCTC
CATATTCCCG GCACCCGGCC GGGCATGGAC GTGGTAAAGC AGATTACTAT CGAGAAAGTC
AAGGCCGAGG TGGATCCTAA GGATCCGCAG CAGATCATCG TCACCGTGAT TCTCCGCATC
TTCGTGAAAG TAACCGAGGC GGAACCGAAG CAGTTGCTGA TCGATCTGCC CGGCGCCGAG
CGGAAGTTCG TCCGCGATGA GGTGCGACTG GATATCGTCA AAGCCATCGG GCGCAGACAG
GTGGTGGTGA GCGACCAGGT CGACATCCAG CAACTGTTCC AGGGCAAGAA ACCCTGCCCC
AAAGAAGTAA TCGACACCAT TGCCGACATC ACGATCACCA AGAAGGAAAT CATTCAGGAC
AAGGTGATCG TGGAAGGCGT CCTGACCGCG CAGATCATCT ACGTAGCCGA TTGGCCCACC
CAGCCGGTGC ACCACGCCCA CGTGGAGATC CCGTTCACTC AGTTTGTCGA AGTGCGCGGA
GCCCGCCCCG GGGATATGGT AAACGTTCAG GTGCAGATCG AAGACGTCGG CGCCCGGGTC
AAGCACGAGT GTGAGATTTC AATCACCGCG GTGCTGGCGC TGCAGGCGTT CGTAATGGAG
CAGATCAGGA AACAGGTCGT GGTGCGCATT GACGACGACC TGCTGGCGTG TCTCCTGGAA
GCACAGGCCA TCCGGCAGAT CACCCTGTTC CTGGACCAGA TTCTGAACGA GCAGGACCAG
GTTCAGATCA CCCTACGCGA GATCGTCACT ATTCCCCAGC CGAAGCCGGA TGCCGAAAAG
GTGCTGGAGG CCTTCGTGAC CGACGTCACG GTGACCGAGA CCGACGTCAT CCCTAACAAG
GTAATCGTCC GGGGCGTGGT GACCGTAAAA ATCACCTACG TGCGGGATGC GCCGGACCAG
CAGGTGCACG CCTTCCAGGC TGAGATCCCG TTCACCGCCT TCATCGAGGT GCCAGGGGCC
CAACCCGGCG CGGCGGTAAA TGTAATGGCC GAAGCCGAGT TCGTTTCGGT GGGTCTGGAG
GATAAGCGCC GGATCGTGGT GAAGCTGGTG CTGAAGGTTA CCGCGCGGGT GACCGATATC
GTGCAGAAGA AGCTGTTTGA ATGCCTGCGG CCCGGGGAAG AGATCGTTTG TCCTACTATA
CCCCCGGTCG AGCCCAAAGT GCCGGAGAAG AAACCCACAC CTACTCCCAC TCCCGGCAGG
ACCTACGTGA TTCAGCCCAG AGACACCTTC TTCAAACTGG CCCAGCGTTT CGGCACGACG
GTGCAGGCCA TCCAGGCGGT GAACCCGGGA GTGGATCCGA ACCGCCTGCA GATCGGTCAG
GTCATCAACC TGCCCTAG
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| Protein sequence | MLSQQELKVR IVCQEETVRQ VIGEQTVQTV VRGKITIPKQ KPKAEQILAV RARVEEQEME
IIPDKVIVQG KIVFNVTYVA DFPTQPVHHV RGQLEFAESL HIPGTRPGMD VVKQITIEKV
KAEVDPKDPQ QIIVTVILRI FVKVTEAEPK QLLIDLPGAE RKFVRDEVRL DIVKAIGRRQ
VVVSDQVDIQ QLFQGKKPCP KEVIDTIADI TITKKEIIQD KVIVEGVLTA QIIYVADWPT
QPVHHAHVEI PFTQFVEVRG ARPGDMVNVQ VQIEDVGARV KHECEISITA VLALQAFVME
QIRKQVVVRI DDDLLACLLE AQAIRQITLF LDQILNEQDQ VQITLREIVT IPQPKPDAEK
VLEAFVTDVT VTETDVIPNK VIVRGVVTVK ITYVRDAPDQ QVHAFQAEIP FTAFIEVPGA
QPGAAVNVMA EAEFVSVGLE DKRRIVVKLV LKVTARVTDI VQKKLFECLR PGEEIVCPTI
PPVEPKVPEK KPTPTPTPGR TYVIQPRDTF FKLAQRFGTT VQAIQAVNPG VDPNRLQIGQ
VINLP
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