| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4098 |
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| Symbol | |
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| ID | 3566714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 4394031 |
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| End bp | 4396883 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637682570 |
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| Product | inner-membrane translocator:ABC transporter related |
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| Protein accession | YP_287294 |
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| Protein GI | 71909707 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCC AGATTCTCCT TCTTCTCGGC CAGGATGGCA TCACCAACGG TGCCATCTAT
GCCTTGCTCG CCCTCGCGCT GGTGCTCGTT TTTGCCGTCA CCCGCGTCAT CTTCATTCCC
CAGGGCGAAT TCGTCGCCTT TGGCGCGCTG ACGCTGGCCT CACTGCAGGC CGGCAAGGTA
CCGGGCACGG TCTGGTTGCT GCTCGGCCTG GGTACCACCG TCGCCATCCT CGACGGTTAC
CGCCTGTTGC GTGAAGGCCG CTACGCCAAG CTGCCGCCGC TGCTCATCGT CAATGTCGGT
ATCCCGCTGC TCTTCGCCGC CGGGCTGTTC GCCATGCCGC CAACCCAGTT GCCACTGTGG
ACGCAGGTGG TCATCGCCAT GCTGCTGGTC GTACCGCTCG GCCCGATGAT CTACCGCATC
GCGTTCCAAC CCCTGGCCAG CGCGCCGGTA CTGGTGCTGC TGATCGTCGC AGTGGCCGTC
CATCTGGCGC TGATCGGCCT CGGCCTGCTC TTCTTCGGGG CCGAAGGCTG GCGCACCCCG
GCCTTTACCG ATCTCAGCTT CGAACTGGCC GGCGCCCCGC TGCAGGGGCA AACCGTCCTG
GTCGTCGTCG CCTCGGCACT ACTGATCATC GGGCTGTATT TCTTCTTCGA ACGCACCATC
TACGGCAAGG CGCTGCGTGC CACCGCGATG AACCGCACCG GCGCCCGCCT GATGGGTATT
CCGCCCGTGC TGGCCGGCAA GCTGTGCTTC ACGCTGGCCG CCGCCATCGG CGCCTTCTCC
GGCATCCTGA TCGCCCCGAT CACCACCATC TACTACGACT CCGGCTTCCT GATCGGCCTC
AAGGGTTTCG TCGGCGCCAT CATCGGCGGC CTGGCCTCCT ATCCGCTGGC GGCACTGGGC
GCCATCCTGG TCGGCCTGCT TGAATCTTAT TCGTCCTTCT ACGCCAGCGC CTTCAAGGAA
GTCATCGTTT TCACGCTGAT CATCCCGGTG CTGTTGTGGC GCTCGCTGAC CGCGCACCAC
ATTGAGGAAG AGGAAGAAAA GGGCGACGAG GCACCGGCTG GCAAGATCAC CACCGGCAAG
CGCAGCGCCA GCCTGATCCG TCACCTGCCG ATGCTGGCCT TCGTTGCCGT GCTCGGCATC
AGTCCGCTGC TACTGCCTGA ATTCACCATC ACGCTGCTCA ACTACATCGG TCTCTACGCC
GTCGTCGCCG TCGGTCTCGT CCTGCTGACC GGTGTCGGCG GTCTGACTTC GTTCGGGCAA
GCGGCTTTCG TTGGCCTCGG TGCCTACACG ACGGCCTGGC TGACCACGGT TTATGGCCTG
TCGCCGTGGC TGACCCTGTT CATCGGCATG GCCATCACGG CCGCCGTCGC CCTGTCGCTC
GGCTTCATCA CGCTGCGCAT GGGCGGCCAC TACCTGCCGC TGGGGACCAT CGCCTGGGGC
ATCAGCCTGT ATTTCCTGTT TGGCAACGTC GAATTTCTCG GCGGCCACAC CGGCATCACC
GGCATCCCGG CCGTCTCGCT GTTCGGCTGG GAGCTGAAAT CAGGCCGGGA ATTCTTCTAC
CTGATCTGGC TGGTCGTGCT GCTGGCCATC GTCAGCATCC GTAACCTGCT CGATTCCCGC
GTCGGCCGGG CCATCCGGGC ACTCAAGGGC GGCACGGTGA TGGCCGAGGC GATGGGCGTC
AATACGGCCC GCGAGAAGAT CATCATCTTC CTGATCGCCG CCCTGCTGGC CAGCATTTCC
GGCTGGCTCT ATGCCCACCT GCAGCGCTTC GTCAATCCGA CGCCGTTCGC GCTGAACCAG
GGTATCGAAT ACCTGTTCAT GGCGGTGGTC GGTGGCATCG GCCACGTCTG GGGCGCCGTG
CTCGGCGCCG GCGTGATCAC CATCCTCAAG CAGTGGCTGC AGGACTTGCT GCCGCAATTG
CTCGGCCAAA GCGGCAATTT CGAGGTCATC GTCTTCGGCA TCGCCATGGT GTTGATCCTG
CAGAAGGCGA GGGCAGGCTT GTGGCCCGTC ATCCTGCGTC TGCTGCCTTC GCGCAGCATC
ATCCGCGAAG TGCCGCAGGC CGAGGCCCTG CCCAAGCGCC AGCCGACCGC TGCCGGCAGC
TTGTTGCTGG AAGCCAGCGA GGTGACCAAG CGTTTCGGCG GACTGGTCGC CAACAACAAC
ATGAGCCTGA CCGTGCAGGC TGGCGAAGTG ATGGCGCTGA TCGGCCCGAA TGGCGCCGGC
AAGAGCACGA TGTTCAATTG CATCTCGGCA GTCAATCCGG CCACCGAGGG CAAGATCGCC
TTCCTCGGCG AATCGACGGC CGCATTGGCC GCCCGTGACA TCGCCCGGCG CGGCATGAGC
CGGACTTTCC AGCACGTGCG GCTGCTCGGC AACATGAGCG TGCTGGAAAA CGTCGCCATC
GGCGCCCATC TGCGCGGTAG CAAGGGTGTC CTCGCCGCCG CGCTGCGCCT CGACCGGGCC
GAAGAAAACC GTCTGCTCGC CGAAGCCGCC CGCCAGATCG AGCGTGTCGG CCTGGCCGAG
CACATGTTCG ACGCCGCCGG CAGCCTGGCC CTTGGCCAGC AGCGCATCGT CGAAATCGCC
CGCGCCCTGG CTTCCGATCC CTGCCTGCTG CTCCTTGACG AACCGGCCGC CGGTCTGCGC
TACAAGGAAA AGCAGGCGCT GGCCGAACTG CTGCGCAAGC TGCGCGCCGA AGGCATGGGC
ATCCTGCTCG TCGAACACGA CATGGACTTC GTCATGGGAC TGGCCGATCG GGTCGTCGTC
ATGGAATTCG GAGAAAAGAT CGCCGAAGGT CTGCCGGAGC AAGTCCAGCA GGATCCGAAG
GTACTTGAAG CTTATCTGGG AGGGGTCGAA TAA
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| Protein sequence | MDLQILLLLG QDGITNGAIY ALLALALVLV FAVTRVIFIP QGEFVAFGAL TLASLQAGKV
PGTVWLLLGL GTTVAILDGY RLLREGRYAK LPPLLIVNVG IPLLFAAGLF AMPPTQLPLW
TQVVIAMLLV VPLGPMIYRI AFQPLASAPV LVLLIVAVAV HLALIGLGLL FFGAEGWRTP
AFTDLSFELA GAPLQGQTVL VVVASALLII GLYFFFERTI YGKALRATAM NRTGARLMGI
PPVLAGKLCF TLAAAIGAFS GILIAPITTI YYDSGFLIGL KGFVGAIIGG LASYPLAALG
AILVGLLESY SSFYASAFKE VIVFTLIIPV LLWRSLTAHH IEEEEEKGDE APAGKITTGK
RSASLIRHLP MLAFVAVLGI SPLLLPEFTI TLLNYIGLYA VVAVGLVLLT GVGGLTSFGQ
AAFVGLGAYT TAWLTTVYGL SPWLTLFIGM AITAAVALSL GFITLRMGGH YLPLGTIAWG
ISLYFLFGNV EFLGGHTGIT GIPAVSLFGW ELKSGREFFY LIWLVVLLAI VSIRNLLDSR
VGRAIRALKG GTVMAEAMGV NTAREKIIIF LIAALLASIS GWLYAHLQRF VNPTPFALNQ
GIEYLFMAVV GGIGHVWGAV LGAGVITILK QWLQDLLPQL LGQSGNFEVI VFGIAMVLIL
QKARAGLWPV ILRLLPSRSI IREVPQAEAL PKRQPTAAGS LLLEASEVTK RFGGLVANNN
MSLTVQAGEV MALIGPNGAG KSTMFNCISA VNPATEGKIA FLGESTAALA ARDIARRGMS
RTFQHVRLLG NMSVLENVAI GAHLRGSKGV LAAALRLDRA EENRLLAEAA RQIERVGLAE
HMFDAAGSLA LGQQRIVEIA RALASDPCLL LLDEPAAGLR YKEKQALAEL LRKLRAEGMG
ILLVEHDMDF VMGLADRVVV MEFGEKIAEG LPEQVQQDPK VLEAYLGGVE
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