Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3794 |
Symbol | |
ID | 3567950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4078821 |
End bp | 4080374 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637682269 |
Product | methane/phenol/toluene hydroxylase:YHS |
Protein accession | YP_286993 |
Protein GI | 71909406 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.00765464 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00329078 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGACATGA AAGCCAACAA GAAAAAGCTG GGCCTGAAGG AAAAGTACGC CCACATGACA CGCGGCCTGG ATTGGGAAAC CACCTACCAG CCGAAGGACA AGGTATTTCC GCAAGCCACC TTCGAGGGCA TCAAGGTGCA CGACTGGGAC AAGTGGGAAG ACCCCTTCCG CCTGACCATG GATGCCTACT GGAAATACCA GGCTGAAAAG GAGCGCAAGC TGTACGCCGT GCTCGACGCC TTCGCCCAGA ACAACGGCCA CCTCGGGATT ACCGATGCGC GCTATCTGAG TGCCGTCAAA CTGTTCCTGA CCGGCATTTC GCCGCTGGAG TATATGGCCC ACCGTGGTTT CGCTGCAGCC GGCCGTAATT TCCCCGGCGT TGGTCCCCGC GTTGCCTGCC TGATGCAGTC GATCGACGAA GTGCGTCATG CCCAGACCCA GATCCACGCC CTGTCGAACT ACAACAAGTT CTACGAAGGC TTCCATGCCG GCGCAAGCCA CCAGATCGAA CGCCTCTGGT ACCTGTCGGT GCCCAAGTCC TTCTTCGACG ACGCCTTCAG TGCCGGCCCC TTCGAATGGA TGATCGCCAT CGGCTTCTCC TTCGAATACG TGCTGACCAA CCTGTTGTTC GTGCCCTTCA TGTCCGGTGC TGCCTACAAC GGCGACATGG CGACCGTGAC CTTCGGTTTC TCGGCGCAAT CCGACGAAGC CCGCCACATG ACGCTGGGCC TCGAGTGCAT CAAGTTCATG CTCGAACAGG ATCCGGACAA CCTGCCCATC GTCCAGAAGT GGATCGACAA GTGGGCCTGG CGCGGTATCC GCGTGTTGAG CCTGGTCTCC ACGATGATGG ACTACATGCT GCCGAAGCGC GTGATGAGCT GGAAGGAAGC CTGGGAAATC TACTTCGAGC AGAACGGCGG CGCGCTGTTC AACGATCTGG CCAAGTACGG CATCAAGGTC CCGGACTGCA TCGCCCAATG CACCGTCGAC AAGGAGCATC AGTCGCACCA GCTGTGGCTG ACCTTGTGCA CCCACTCGCA TGCGATGGGC CTGCACACCT GGCTGCCCGA TGCCGACGAG ATGGACTGGT TGTCGGCGAA ATACCCGAAC ACCTTCGACA AGTACTACCG TCCGCGTTTC GACGAGCTGC GCGAACGTGC CGACAAGGGC GAGCGCTTCT TCGCCAACAC GCTGCCCATG CTGTGCCAGG TCTGCCAGAT TCCGATGCTC TTCACCGAGC CGGACGACCC GACCAAGATC TGCTATCGCG AGTCGGAGTT CCAGGGCGAG AAGTACCACA CCTGCTCGGA TGGCTGTAAG CACATCTTTG ACGACGAGCC GGAGAAGTAC ATCCAGGCCT GGTTGCCGGT ATATCAGCTT TATCAGGGCA ATTGCTGGCC GGAGGGCACT GATCCGACGG CCGAAGGATT CAATCCGGTG GCCAAGTATC TCGAATGGTG CCACATCGAT GCCAAGGACA CCGGCGATTA CGAAGGCTCC GGTGACCAGG CGAACTTTGC TGCCTGGCGT GGCGCGGCCA CCCAGAACAC CTGA
|
Protein sequence | MDMKANKKKL GLKEKYAHMT RGLDWETTYQ PKDKVFPQAT FEGIKVHDWD KWEDPFRLTM DAYWKYQAEK ERKLYAVLDA FAQNNGHLGI TDARYLSAVK LFLTGISPLE YMAHRGFAAA GRNFPGVGPR VACLMQSIDE VRHAQTQIHA LSNYNKFYEG FHAGASHQIE RLWYLSVPKS FFDDAFSAGP FEWMIAIGFS FEYVLTNLLF VPFMSGAAYN GDMATVTFGF SAQSDEARHM TLGLECIKFM LEQDPDNLPI VQKWIDKWAW RGIRVLSLVS TMMDYMLPKR VMSWKEAWEI YFEQNGGALF NDLAKYGIKV PDCIAQCTVD KEHQSHQLWL TLCTHSHAMG LHTWLPDADE MDWLSAKYPN TFDKYYRPRF DELRERADKG ERFFANTLPM LCQVCQIPML FTEPDDPTKI CYRESEFQGE KYHTCSDGCK HIFDDEPEKY IQAWLPVYQL YQGNCWPEGT DPTAEGFNPV AKYLEWCHID AKDTGDYEGS GDQANFAAWR GAATQNT
|
| |