| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3533 |
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| Symbol | |
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| ID | 3567611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3784182 |
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| End bp | 3784862 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637682006 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_286732 |
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| Protein GI | 71909145 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.018902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTT CGACCGTTCT CCCGTCTGCT TTGCAGCGCA TCTCTACCGT AGCTCTCGAT
TTTTTCCAGA AGTTCCTGAT GATCGCGGGC CTTGTTTTCA TCGTTGGCTT GATTGGCGTA
CAAACCGGCC GTCTCGACCT GGTCGGGAAT CTCAAGTCGC TTCTGCCCAG TGCCGAAGCA
TCCGTGGCCG AAGAGGCCAC TGCCGAAGAG CTTGAACCGG AACCTGCCTC GCTCAATGCT
CGTATGCGGG GGGCCATGAA CTATGTCTCC CACCGTTATC GCGTTTCCGA TGAGGCCTTG
AGACCGATTT TTGCCACAGC CCAGGCGGTC GGTCGCGAAT TGCATCTCGA CCCCTTGCTG
ATCATCGCAG TGATCGGCGT CGAGTCTGGA TTCAATCCGT TTTCGCAAAG TGTCGTTGGT
GCGCAGGGAC TGATGCAGGT CGTGCCACGC TTCCATCACG ACAAATTGCC AGAGGATGCT
GACTCCTTCC TTGATCCAGT CACCAACGTC CTGGTCGGTG CTCGCGTCCT GAAGGAATCG
ATCAGCCGCA ACGGTGGTCT GGAAGATGGC CTGCAGCAAT TCGGCGGGGC TGCCAATGAC
GCCAATCGTC GCTACGCGAC CAAGGTGCTG GCTGAAAAGC AACGTCTGGA GCAGGCGGTA
CAGCGTCTTC GCGCCGCCTG A
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| Protein sequence | MIASTVLPSA LQRISTVALD FFQKFLMIAG LVFIVGLIGV QTGRLDLVGN LKSLLPSAEA
SVAEEATAEE LEPEPASLNA RMRGAMNYVS HRYRVSDEAL RPIFATAQAV GRELHLDPLL
IIAVIGVESG FNPFSQSVVG AQGLMQVVPR FHHDKLPEDA DSFLDPVTNV LVGARVLKES
ISRNGGLEDG LQQFGGAAND ANRRYATKVL AEKQRLEQAV QRLRAA
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