| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3508 |
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| Symbol | |
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| ID | 3567776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3757971 |
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| End bp | 3759887 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637681980 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_286707 |
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| Protein GI | 71909120 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0970585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGC TACTGTTTTT TGCATTGACC TGGCTCGGTG TCGCCTCGTT GCTGGTTTTT
TTGCTATACG AGGGGCGCCA CGAGGCTGAA CGAAAGGCCG AGTCGGATGC TCTGGGGGCC
TCCGCCCTCC TGGTGGGGCG TCTGGAGGTA ATAATACGGC GGATTCAGGG CGATCTGGAA
CATCTCGCTG CTTCCTTGCC TCACGATGCC CTGAAACCGG GTGCGGGTGC TCGTTTTCGC
CAGGGTATTG TCAGTGAGCT TGCCTATTAC TCTGGACGCT TTCCGGAGAT TCTCGGCTAT
CGAGTTATCG ATGCGTCAGG TAATTTGCTC TATGCGCAGG ATGCCTCACT GTCGCCTGTA
AGCTTGAGTG ACCGTAGCTA CTTCAAGGTC TTTGCCGAGA GCTCGGACAG GTCGCTTTTC
TTCTCGGAGG TGCAGGTCGA TCCTCTATCC GGGCGCTCTT CGCTAATGTT GGCATTGCCC
ATACGCGACG ATGCCGGAGG CTTGCTCGGT GTGGTGGCGG CTCCGCTGGA TATTGGGAAT
CTGTCACAAA TGCTGGAGAC GCTCGATATC GGTCAAAATG GCGCTGTCGC AGTGCGTCGA
ATCGATACCG GGGGGCTGGT TCTGCGTCGG CCGTTTGTGC CCGAATTGCT CAATCAGCCG
GCGCTGAACA ATCCGCTGCA AATGAGACTG GCGGCAGGGG AGCGCTTCGG GGTTAACCGG
CTTCGCTTGG CAATCGATGG CGTCGAGCGT ATTTATGGAT TTAGGCGTGT CGGCGACTAC
CCGCTGTACG TGACCACCGG CTTGGCGACT GCGGATTTCC TGGCTGGCTG GCATCAGACC
TTTGCCATGG CTGGGGTGGC GGCGTTACTT CTTTTCCTGT CGTTATCGTT GCTGCTGATC
CGCCTTCTGC GTGCCGAGCG AGAGGCGGAG TTGACCGCTA GCCGATTGAT GGAAAGCGAG
GCGCGCTACC GCATGCTGGC CGAGAACAGC CATGACGTTA TCTGGACGCT CGATATTCCC
AGTCGAACTT ATACCTACGT CAGTCCCGCC ATTAAGGAAA TGTCCGGTTA TTTGCCAGAA
GAAACCGTCG GGCAGCCGCT GGATGTGCGG CTGACTCCGG ACTCTGCGGC TCGCGCGGCA
CGCGATATTG ATCAGCGGCT ACGGCGGATC GCGGCGGGTG ACAAGGCGGC CAGCGTCGTC
GTCAGTGAAC TGGAACAGGT GCGTAAGGAC GGTGAGGTCA TTACAACGGA AGTGGTTTCC
AGTTACCTGC TGGATGCGGA TGGTGTGGCG CAAACGATTC TTGGCATTAC GCGCAATGTC
AGCGAGCGCA AGGCTGTAGA AAGTGCCTTG CGGGAAACCA ACCGTCAGTT GCATGCGCGT
ATTGAAGAAA TTGGGCGCTT GCAGGTGGCG CTGCAGGAGT TGGCGGTGCG CGACAGCCTG
ACTGGCTTGT ACAACCGGCG CTATCTCGAC GAAACCCTGG AGCGAGAAGT TTCCCGGGCT
CGTCGTGAAG GCATTCCACT CTCTTTGGTG ATGTTGGATA TCGACCATTT CAAGCAGGTA
AACGATACCT ACGGACACCA GGTCGGCGAT GAAGTGTTGC GTATCCTTGC CTCGACCCTG
TCGGCCGACA TTCGGGCTGA GGACGTCGCT TGCCGCTACG GTGGTGAGGA GTTCCTGATC
TTGCTGCCCA ATATGCCGCT TGAAACAACG ATGCTGCGTG CCCAAGGGTG GCGGAGTGCC
GTCGAGGCGC TATCGGTAAA GCATGGCAAT TTCCAGATTA CCTTCACAAT ATCGCTGGGG
GTTGCTGCTT ATCCAGAGCA TGGCAAAACC CCGGACGACC TGACGCGTTG CGCCGATCAG
GCGCTCTACC GGGCCAAGAA CGAAGGTCGC AACCAGGTAT CCGTCTTTTT CGACTGA
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| Protein sequence | MRLLLFFALT WLGVASLLVF LLYEGRHEAE RKAESDALGA SALLVGRLEV IIRRIQGDLE
HLAASLPHDA LKPGAGARFR QGIVSELAYY SGRFPEILGY RVIDASGNLL YAQDASLSPV
SLSDRSYFKV FAESSDRSLF FSEVQVDPLS GRSSLMLALP IRDDAGGLLG VVAAPLDIGN
LSQMLETLDI GQNGAVAVRR IDTGGLVLRR PFVPELLNQP ALNNPLQMRL AAGERFGVNR
LRLAIDGVER IYGFRRVGDY PLYVTTGLAT ADFLAGWHQT FAMAGVAALL LFLSLSLLLI
RLLRAEREAE LTASRLMESE ARYRMLAENS HDVIWTLDIP SRTYTYVSPA IKEMSGYLPE
ETVGQPLDVR LTPDSAARAA RDIDQRLRRI AAGDKAASVV VSELEQVRKD GEVITTEVVS
SYLLDADGVA QTILGITRNV SERKAVESAL RETNRQLHAR IEEIGRLQVA LQELAVRDSL
TGLYNRRYLD ETLEREVSRA RREGIPLSLV MLDIDHFKQV NDTYGHQVGD EVLRILASTL
SADIRAEDVA CRYGGEEFLI LLPNMPLETT MLRAQGWRSA VEALSVKHGN FQITFTISLG
VAAYPEHGKT PDDLTRCADQ ALYRAKNEGR NQVSVFFD
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