Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3453 |
Symbol | |
ID | 3567858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 3702578 |
End bp | 3703393 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637681925 |
Product | peptidase M23B |
Protein accession | YP_286652 |
Protein GI | 71909065 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAT CTCACTTCGC CCTGGCCTTG CTCATCAGCC ACGCCACCAT GGCCATCGCC TTGCCGAAAA ACTCGGCGGT CCCCGGCGGC GTTGCCGTCA TCGACCTCGG CCCGGCCAGC CAGACAACGC CGACCGCCCG CTGGGGAGAA CAGCCCATCG CGGTCGTTCG CGACAATGGC CGCTGGTTCG CCCTGCTCGG CATTCCGCTC GACACCCTGC CCGGCGATCT GGAAATCAGG ATTTCAAGTG GGGCAGCGAC AACGACCAGG CAGGTCGCCG TGCAGATCAA GAATTACCCC GAACAGCGCC TGACCATCAA GGACAAACGC AAGGTCGAAC CGAACGCCGA AGACCTCGCC CGCATTGAGC GCGAACAAAA GATCACCGAG GCGATCAAGA AACATTTTGC CAATTCCGCA CCGGCCACCG ATTTCACCCT GCCAGCCAGC GGGCCGCTGT CTTCACGTTT CGGCCTGCGC CGAATCTTCA ACGGCCAGCC GCGCAACCCG CACGCAGGAC TTGATGTTGC CGTTGGCACG GGCACACCAG TCAAGGCACC GGCCGATGGG ATCATCGCAA ATACCGGCGA TTATTTCTTC AACGGCAACA CCGTCTTCAT TGACCATGGC CAGGGCCTGA TTACCGCTTA CATGCACCTA TCGCGGGTCG ACGTTCGCGC CGGACAGACG GTCAAAAAAG GGGAAGCGCT CGGCGCCGTC GGCTCGACCG GACGAGCCAC CGGCCCGCAT CTGCACTGGG CCGTAACGCT CAACAATACC CCGGTCGATC CGGAGCTTTT CCTCAGCAAA CCATAA
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Protein sequence | MKLSHFALAL LISHATMAIA LPKNSAVPGG VAVIDLGPAS QTTPTARWGE QPIAVVRDNG RWFALLGIPL DTLPGDLEIR ISSGAATTTR QVAVQIKNYP EQRLTIKDKR KVEPNAEDLA RIEREQKITE AIKKHFANSA PATDFTLPAS GPLSSRFGLR RIFNGQPRNP HAGLDVAVGT GTPVKAPADG IIANTGDYFF NGNTVFIDHG QGLITAYMHL SRVDVRAGQT VKKGEALGAV GSTGRATGPH LHWAVTLNNT PVDPELFLSK P
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