Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3157 |
Symbol | |
ID | 3568398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3392629 |
End bp | 3394773 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637681628 |
Product | TonB-dependent receptor |
Protein accession | YP_286357 |
Protein GI | 71908770 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAAC CTGAAACGCG AATTCCGCTG TGCCTGCGAC AGGCGACTTT GCTCGTCGCC ACGGCGCTCG CCTTCCCCGC ATGCGCCGAG GAAAACCTGT TTTTCAGCGA GATGCCGATC ATCGCTTCGG TCAGTCGTTT GCCACAACAG CTGTCCGAAA CACCGGCCTC GGTCACGGTG ATCGATCAGG AAATGATCCG GGCTTCCGGT ATGCGGACGG TTGAAGACCT GCTACGGCTG GTGCCCGGCT TTCAGGTGAC TTCGCATAAT CAGGATCCGG CCATCGTCGC CTATCACGGG CTGAACTATG GCTTGTCCAG CGAGGAGTAC GGGCCGCGGG TCCAGGTGCT GGTCGATGGT CGTTCCCAGT ACTCCCCACT CTTCAAGTCC GGGGTGAACT GGAATCTGTT GCCGGTGGCG CTGGAGAACA TCGAACGTAT CGAGGTCATT CGCGGTTCGA ACACCGTTTC CTACGGTTCG AATGCCTTCA TGGGGGTGAT CAACATCATC ACGATGGACC CTGCCCTGAC CAAAGGCTGG ATGGTTTCGG CCAACCACGG CAACAACGGA ATTCGTGATG AAGTCTTGCG CTGGGGCGGC AGCCTCGGTG ACGCCAATCT CCGCTTCACG GCGCGCTCAT TTCAGGATGA CGGTTTTCAG TATGGCTACT ACAGCGGCCG ATGGACTTAT TCTCCGGATA ACCGCCAATC GCAATTATTC GATCTGCGGG CAGATATTCC GCTGACTGAT CGTGACGAAC TGCAATTGAC AGGAACCTTT GCGCGCGACA TGTCGCAGTA TGGCCGGCCC GGCAGTCCGG TCAACGACCC CATCCGTAAT CTCGAACAGT ATTCGGCAGC CTTCGGCATC CTGTGGCGCC GAACCCTCTC TGCAACCGAA GAAACCAAGC TGCGCTATGG CTATAACGAT GATCGGGCAC AGGGGCCATT CCGTACCAGG GTGAACTTCA CGACCAATCG CGTTGCGCCG GCATCGGTCA CCTTTTTTCC AGGCGTTGAT CCGGGGGGGC GCTCGCAGCA GCATGAGCTT GAGTTCGAGC ATCTGCTTTC CCCGCGTAAG GATCTGCGAT TCATGTGGGG GCTTGGACTC AAATCCACTT CCGTGCAGTC GTACGAGCAG TTCTCGTCAA CGGAGTGGAA GAGCCGGTTC GCCTATCGTG CATTCGGAAA TCTCGAATAC CGCCTGATGG ACCCCCTGCT CTTCAATCTG GGGGGCAGTT ACGAACACGA CAATATCAGC GGCGATATGT TTGATCCGAG GGCGAGTGTG AGCTTTCACG TGATGCCCGG GCATACCATC CGCCTCGTTG CCTCGCGGGC GCATCGCAAC CCCAGCCTGT ATGAGGCGGC AGGGCACTCG GAGCGACGCG ATATCGGCGG GACTGGCCTG GTCGACATTC TCTACTATGC CCAGGGCGTC AAACCCGAGC AGATCGACAC ACTTGAACTC GGCTATCTGG CCGAGTTGAA GGAATATCGG GCCACTGCGG ATGTCAGGGT ATTCAGCGAG AGGATTCCCA ATTACATCCA GATATTGCCG CTGGCATTGC CCGCCAGCAT GCCTGATGAC AGAGAAACCT CCGCTCCGTT CGGAGGTCTG CGGATGAATG CGGTGAATTA CGCCGTGTTT CCCAACGGCC GTGCCGACAG TGCCGTCAAC CTGGAAAATG TCCGTATCCA GGGTTACGAA TATCAGTTGA ACTGGCGCCC CTTCGAAACG ACCCGGTTGA TGTACGGTAA TTCACTGATT TGCGTGACAG CTGACTTTAC CGATATTTCA CGGATTGCCG ATGACTTCAA CAACGGACCC AAGATCATTC GCCAGACCCG CGATTCGGCA CCCACCCACT CGCAAACGGC CATGCTGATT CAGAAGCTGC CCTACGACCT TACCGCGTCA ATCATGTATT TCCGGGCTTC GCCCATGCGT TGGCGGCGGA ACGACGATTA TCCGATCGAA GCCAGCGAGC GGATCGACTG GCGCCTGGCC AAAGCCTTCC GTTTAGGCCC GATGGGCGGA GAACTCGCCT ACATTGCGCA GATGGTCAAT GAGCAGCAGC AGGGACGGAC GATCAATCGT TTGGCGGATC GCGTTCACTG GTTGTCGCTG CGCCTCAATT TCTGA
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Protein sequence | MKKPETRIPL CLRQATLLVA TALAFPACAE ENLFFSEMPI IASVSRLPQQ LSETPASVTV IDQEMIRASG MRTVEDLLRL VPGFQVTSHN QDPAIVAYHG LNYGLSSEEY GPRVQVLVDG RSQYSPLFKS GVNWNLLPVA LENIERIEVI RGSNTVSYGS NAFMGVINII TMDPALTKGW MVSANHGNNG IRDEVLRWGG SLGDANLRFT ARSFQDDGFQ YGYYSGRWTY SPDNRQSQLF DLRADIPLTD RDELQLTGTF ARDMSQYGRP GSPVNDPIRN LEQYSAAFGI LWRRTLSATE ETKLRYGYND DRAQGPFRTR VNFTTNRVAP ASVTFFPGVD PGGRSQQHEL EFEHLLSPRK DLRFMWGLGL KSTSVQSYEQ FSSTEWKSRF AYRAFGNLEY RLMDPLLFNL GGSYEHDNIS GDMFDPRASV SFHVMPGHTI RLVASRAHRN PSLYEAAGHS ERRDIGGTGL VDILYYAQGV KPEQIDTLEL GYLAELKEYR ATADVRVFSE RIPNYIQILP LALPASMPDD RETSAPFGGL RMNAVNYAVF PNGRADSAVN LENVRIQGYE YQLNWRPFET TRLMYGNSLI CVTADFTDIS RIADDFNNGP KIIRQTRDSA PTHSQTAMLI QKLPYDLTAS IMYFRASPMR WRRNDDYPIE ASERIDWRLA KAFRLGPMGG ELAYIAQMVN EQQQGRTINR LADRVHWLSL RLNF
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