| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3010 |
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| Symbol | |
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| ID | 3567323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3253604 |
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| End bp | 3256957 |
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| Gene Length | 3354 bp |
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| Protein Length | 1117 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637681481 |
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| Product | transglutaminase-like |
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| Protein accession | YP_286210 |
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| Protein GI | 71908623 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases
[COG4196] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.424161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGATCC ACGTCGCCCT GAATCACGTC ACCCGTTACA GTTACGACCG CCTGATCAAT
CTCGGTCCGC AGGTTATCCG CCTGCGCCCG TGCCCGCATT CACGGACTCG TATCCTGTCT
TACTCGCTGA AGATCGGGCC GGAAAAGCAT TTTGTTAATT GGCAGCAGGA TCCGCAGGGC
AATTATCTGG CCCGCCTGGT CTTCCCGGAG AAGACCCGAG AGTTCAGCAT TGAAGTTGAT
ATGGTCGCCG AGATGTCGGT GATCAATCCA TTCGACTTTT TCCTCGAGCC GCACGCCGAG
AAGATTCCCT TTGCCTACGA GGCATGGGAA CGTCACGAGC TGACGCCTTA CCTGCACAAA
CTGCCGGAAA CGCCGGAGCT CAAGAAATAC ATGGCCGGCA TTTCGCGTGA ACCGGTGCGC
AGCGTCGATT TCCTGGTCGC CCTGAATGCC AATCTGCAGA AGGCGATCAG CTATACGATC
CGCATGGAGC CGGGTGTCCA GACGCCGGAA GAAACACTGA CCAAGCGTTC CGGCTCGTGC
CGAGATTCAG CCTGGTTGTT GGTGCAGGTA CTGCGCCACC TTGGCCTGGC TGCACGCTTT
GTCTCCGGCT ACCTGATCCA GCTGACCGCC GACGTCAAAT CGCTCGATGG CCCCTCCGGC
CCGGAAGCCG ACTTCACCGA CCTGCACGCC TGGGCTGAAG TCTATCTGCC CGGGGCCGGC
TGGATCGGTC TCGATCCAAC ATCAGGCCTG TTTGCCGGTG AAGGCCACAT TCCGCTCGCC
TGCACGCCGG AACCCGGTTC TGCCGCGCCG GTTACCGGCG GTCTCGACGA GTGCGAGACT
GAGTTCTCAC ACCACATGCA GGTCACCCGC ATCTGGGAAG CGCCGCGGGT CACCAAGCCT
TATACGGACG AACAGTGGAT CGAGATCGAA GGCCTCGGCC ATCAGATCGA CGACACGCTG
GGCAAACTCG ACGTGCGCCT GACCCAGGGC GGCGAGCCAA CCTTCGTTGC GGTCGACGAC
CCCGATGGCG CCGAATGGAA CACGGCGGCC CTCGGTCCGA CCAAGCGCAT TTTCGCTGCC
GACATCTTTC ATCGTCTGCG TGAAAAATAT GCCCCGAACG GCCTGATGCA TTTCGGCCAG
GGCAAGTGGT ATCCCGGTGA GCAACTGCCG CGCTGGTCGC TGAACTGCTT CTGGCGCAAG
GATGGCGAGC CGATCTGGAA TGCGCCTGAA CTGTATGCCA ACGAAAGCGT CAATTACGGC
GCCACCAGCG AACATGCCGA ACGCTTCCTG AAACGCGTTG CTGAGCGCCT GGGCATGACT
GGTGATTACG TCTTCCCGGC TTTCGAGGAC GCTTATTACT ACATGTGGCG CGAACGTCGA
TTGCCCGGCA ATGTCGATCC CTTCGATTCG CGGGTCGACG ATCCGCTCGA GCGCGCCCGT
TTGATGAAGG TGTTCACGCA GGGCATGACC TATACGGTCG GCCACGTGTT GCCGATCATG
AAAAATGTCT GGAATGAATG GCAGACTGGC CCGTGGTTCC TGCGTGCCGA GCGTTGCTAC
CTGTTCCCCG GTGATTCGGC CATGGGCTAC CGCCTGCCGG TCGATTCGCA GCCGTGGACG
GCGCAGAGTG ATTACCCCTA CGTCAATGTG CCGGATGCCG AGACAGCGAC CGATCCGCTG
GCCAGCTATG CTGCCTTGCG CTCCCGAGTG ACCGGAGAAG TCGGCGCCCG TGAACCGCAG
ATGCAGAGCC GTCGTGCCGG CAGTTCTGCA AGCGGGCAGG GCGAAGGTCG GGCCTGGGAA
AAACCGACCG ATACGGTGCC CGGCTTCAAG GAATCGGCCG GCTGGATCAC CCGCCTGGCC
ATGTGTGCCG AACCGCGCGA CGGCCGCCTC TACGTCTTCA TGCCGCCGAC CGAGAAGCTC
GACGATTACC TCGAAATCGT CGCCGCGGTT GAAGCGACGG CCGAAGAGAT GAAGATGCCA
GTGATCATGG AAGGCTACGA GCCGCCGTCC GATCCGCGCC TGACGCACTT CCGCGTCACG
CCCGATCCTG GTGTCATCGA AGTCAACATC CATCCGGCCA AGAGCTGGGA TCAACTGGTC
GACCAGACCA CCCACCTCTA CGAGTCGGCC TATTACTCGC GCCTGACGAC CGAGAAATTC
ATGGTCGATG GTCGTCATAC CGGCACCGGT GGCGGCAACC ACTTCGTGCT CGGCGGCGCG
ACGCCGAACG ATTCACCCTT CCTGCGTCGT CCGGATCTGC TGAAGAGCCT GATCGCCTAC
TGGCACAATC ATCCGAGCCT GTCCTACCTG TTCTCTGGCC TGTTCATCGG TCCGACCAGC
CAGGCGCCGC GCGTCGATGA GGCGCGTAAC GACAGCCTCT ACGAGCTGGA AATCGCCTTC
AAGCAGATAC CGCAGCCAGG CGGCCATGTC CCGCCATGGT TGATCGACCG CATCCTGCGC
AACCTGCTCA CCGACGTGAC CGGCAACACG CACCGCTCGG AGTTCTGCAT CGACAAGCTT
TATTCGCCGG ATGGCCCGAC CGGCCGCCTT GGCCTGCTTG AGTTGCGCGC CTTCGAAATG
CCGCCGCACG CCCGCATGTC GCTGGCCCAG CAACTGTTGT TGCGCGCCAT GATCGCCCGC
TTCTGGGAGC AACCCTACGA ACCGGCTCGC CTGGCGCGTT GGGGTACCGA GTTGCACGAC
CGCTTCATGT TGCCGTTCTA CGCCGAGCAG GATTTCAAGG ACGTCATGCA GGAAATGGCC
GAGGCCGGTT ACCCGTTCAA GGCTGAGTGG TTCGCTCCGC ACTTTGAATT CCGCTTCCCG
AAATATGGCG ATTTTGCCGT CAAGGGCATG GAATTCGAGC TGCGTCATGC GCTGGAGCCC
TGGCACGTCA TGGGCGAAGA GGGTGGTGCC GGGACGACCG TCCGCTACGT CGATTCCTCG
GTCGAACGTG TTCAGGTCAA GATCAAGGGC ATGGCCCCCG ACCGCTACGT GCTGACCTGC
AACGGCGTTC CCGTGCCGCT GCAGAACACC GGGACCAACG GCGAATTCGT CGCCGGCGTG
CGTTACCGCG CCTGGCAGCC TGCTTCGTGC CTGCATCCGA CCATCGGCGT CCATGCCCCG
CTGGTCTTCG ACATTGTCGA TACCTGGATG CAGCGTTCGC TGGGCGGTTG CCAGTACCAC
GTGGCGCATC CGGGCGGGCG CAGTTTCGAC ACCTTCCCGG TCAATGCCTT CGAGGCGGAA
AGTCGGCGTC TCGCGCGCTT CTTCCGCTTC GGCCACACGC CCGGCAAGAT ACAGGTCAAG
GTGCCCGAAA ACAGCGCCGA GCACCCGTTT ACGCTAGACT TGCGTCGGTT TTGA
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| Protein sequence | MSIHVALNHV TRYSYDRLIN LGPQVIRLRP CPHSRTRILS YSLKIGPEKH FVNWQQDPQG
NYLARLVFPE KTREFSIEVD MVAEMSVINP FDFFLEPHAE KIPFAYEAWE RHELTPYLHK
LPETPELKKY MAGISREPVR SVDFLVALNA NLQKAISYTI RMEPGVQTPE ETLTKRSGSC
RDSAWLLVQV LRHLGLAARF VSGYLIQLTA DVKSLDGPSG PEADFTDLHA WAEVYLPGAG
WIGLDPTSGL FAGEGHIPLA CTPEPGSAAP VTGGLDECET EFSHHMQVTR IWEAPRVTKP
YTDEQWIEIE GLGHQIDDTL GKLDVRLTQG GEPTFVAVDD PDGAEWNTAA LGPTKRIFAA
DIFHRLREKY APNGLMHFGQ GKWYPGEQLP RWSLNCFWRK DGEPIWNAPE LYANESVNYG
ATSEHAERFL KRVAERLGMT GDYVFPAFED AYYYMWRERR LPGNVDPFDS RVDDPLERAR
LMKVFTQGMT YTVGHVLPIM KNVWNEWQTG PWFLRAERCY LFPGDSAMGY RLPVDSQPWT
AQSDYPYVNV PDAETATDPL ASYAALRSRV TGEVGAREPQ MQSRRAGSSA SGQGEGRAWE
KPTDTVPGFK ESAGWITRLA MCAEPRDGRL YVFMPPTEKL DDYLEIVAAV EATAEEMKMP
VIMEGYEPPS DPRLTHFRVT PDPGVIEVNI HPAKSWDQLV DQTTHLYESA YYSRLTTEKF
MVDGRHTGTG GGNHFVLGGA TPNDSPFLRR PDLLKSLIAY WHNHPSLSYL FSGLFIGPTS
QAPRVDEARN DSLYELEIAF KQIPQPGGHV PPWLIDRILR NLLTDVTGNT HRSEFCIDKL
YSPDGPTGRL GLLELRAFEM PPHARMSLAQ QLLLRAMIAR FWEQPYEPAR LARWGTELHD
RFMLPFYAEQ DFKDVMQEMA EAGYPFKAEW FAPHFEFRFP KYGDFAVKGM EFELRHALEP
WHVMGEEGGA GTTVRYVDSS VERVQVKIKG MAPDRYVLTC NGVPVPLQNT GTNGEFVAGV
RYRAWQPASC LHPTIGVHAP LVFDIVDTWM QRSLGGCQYH VAHPGGRSFD TFPVNAFEAE
SRRLARFFRF GHTPGKIQVK VPENSAEHPF TLDLRRF
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