| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2987 |
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| Symbol | |
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| ID | 3568521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3225279 |
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| End bp | 3226079 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637681458 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_286187 |
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| Protein GI | 71908600 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGTCT TTTCGCTAAA AAGCCGGATT GTTGGTATCT GTCTGGGCGT GCTGTGCATT
GTCTCCGCGC ACGCGCAGTA CAACTTCAAC CCTTCCTCGA CGGATCAATC CCAAGGGGCG
ACCGAGCCGC GCAATCGGGC CAAGATTCAC ACCGAACTGG GGTCGATGTA TTTTCAGGCG
GGGAACCCCG GGGTTGCGCT CGATGAGTTG CGCATTGCCC TGAATGCTGA CTCCGGCTAT
TTTCCGGCAT ATAACGTTCG CGGATTGGTT CATTTGTCCC TGAAGGAATA TGCCAAGGCG
GAGGACGATT TTCGCCGAGC CCTGGATCTT GCCCCCAATG ATCCCGAAGT TAATAATAAT
TACGGCTGGT ATCTCTGTGA AACAGGCAAG GAACGTCAGT CGATTGCCTA TTTTCTGAAT
GCCCTGAAGA GCCCTTTGTA CGAAACGCCA GACCGTGCCT ACACCAATGC CGGCACGTGT
GCTTTGAAAG CAGGCGACCT CGAAGGGGCG CAGAATTATC TGCTGAAGGC CTTGCAGTTG
TCGCGCGATG GCGCCGTGCA GGCACGCTTG CAACTGGCCA AGGTATTTTA CCGGCGCGGT
ATTTTTGAAG AGGCGCGTGT CTATCTGAAT GATGCGCTGC GCATGATGGA ACCGCCGTCA
GCCGAGGCAC TCTGGCTTGG TCTTCGGCTC GAGCGAAAAA TGGCGAACAA GGTGGCCGAA
TCTGGCTACG CATCGCAACT GCGCAGTCGT TATCCAACGT CGCCAGAGTA TCAGGAATTC
CTAAAGGGCA ATTTTGAATG A
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| Protein sequence | MKVFSLKSRI VGICLGVLCI VSAHAQYNFN PSSTDQSQGA TEPRNRAKIH TELGSMYFQA
GNPGVALDEL RIALNADSGY FPAYNVRGLV HLSLKEYAKA EDDFRRALDL APNDPEVNNN
YGWYLCETGK ERQSIAYFLN ALKSPLYETP DRAYTNAGTC ALKAGDLEGA QNYLLKALQL
SRDGAVQARL QLAKVFYRRG IFEEARVYLN DALRMMEPPS AEALWLGLRL ERKMANKVAE
SGYASQLRSR YPTSPEYQEF LKGNFE
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