| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2653 |
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| Symbol | |
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| ID | 3567145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2847267 |
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| End bp | 2849834 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637681117 |
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| Product | hypothetical protein |
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| Protein accession | YP_285853 |
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| Protein GI | 71908266 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR02746] type-IV secretion system protein TraC |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.696195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCG CCCACAGCGA TCCGCACTTT GCCCGCCAGC GCGACCACGC CCATGCGCCG
CGCTTTCCCT TCGGCGAACC GGCGGACACA CCGGCCGAAC AGTTCGCCAA CTGGCTGCCC
TACTCTGGCT ATCTTGCCGC CGAGAAGATT TTTGTGAACC GCGACAGCAT GGGCGTCATG
CTCGAGCTGA TGCCGCAGTC GGGGGCCGAC GAGCGGATGG CGGAAGTACT GATCTCGCTC
TACGCCAATT GCCCACCTGG CACCGGCATC CAGTTCCATT TGTTCGCCTC GCCGCAGGTG
CGCAGCCAGT TGCGCCAGTA CGCCAATCTG CGGGTCGAGG ATGAGGATCA GGCCGAGCAG
GCCAAACAAT GGGGCCGCCC GGCCCGCAAC GGCAATCTGT TCCGCAAACT GGCTCGCCAG
CGCGTGGACC ACCTGTTGCA GGGAGCACAG AAGTCGCTGA CTGCCGGCTT CCACTACACG
ATCCGGGATT TTCGGCTAAT GCTGAGCGTT GCCTTTCCGG GCAATCCGGA AGACCTCAAC
AAGCGCGACG AACTGCTCGC CCTGCGCGAT TCGATGTCGT CCAGCCTGCG CTCGGCCTCG
CTGCCCAATC GCGTTTGCGA TGCCGCCGAT CTGATCAACT GGTGTGCGCT ATTCACCAAT
CCCGATCGCA TCTCGCAGAC CGATGCGCCG GACCTCAATT ACGATGACGG CCGGGAACTG
CGCGACCAGA TCGTGGACTT CGACACCATC CAGGACCCGC ATCCGAGCGG CCTGACCTTG
TGGAAGGAAG CCAGTCCCGA CGTACTGGAG GCGCGCTTCT ACTCGATCAA AAGTTTTCCG
GAACGCTTCG CGCTGTGGCA GATGGGGTCG CTGATCGGCG ACCTGATGCA GCCGGCCTTG
CAGTACAGCG CACCGTTTCT GCTGACCCTC GGCGTCCAGG TCCTCGACCC CAACCTCACC
AAGTCGGTGG TCACTGCCAA CCATGTGCGG GCGACGCAGA ATGCCAAATC GAAGATGGCC
GACGTCATGC CGGACGTTAA CAAGAAACTG CAGGACTGGA CGGCGGCGGC CGATGCCATC
GACACCGGCG GTAATCTGGT CAGCCTCTAC CACCAGTTGG CGATATTCAC CGCACCCAAC
AAATCGGTTG CCGCCCATGA AGCCGCCAAT GCGATCTGGC GCGGCCGCGG CTTCCAGCTC
AATGCCGACG CTTACATGCA CCGCCAGGCC TTGCTCGCCA GCCTGCCGAT GACGCTGACC
GAGAAATTTC ACAAAGACTT GGTCAAAATG CGCCGGGTCA CGCGCAAGAC CATGGCCAAT
GCCATCCACA TGGCACCGCT GATTGCCGAG TGGCGCGGCA CGCGCACGCC GGCCCTGGTG
TTCGGGGGTC GCCGCGGCCA GTTGATGACG CTCGATATCT TCGACAACGA TCTCGGCAAC
TACAACTTTG CCATCATCGG TGCACCGGGC TCGGGCAAGT CGGTTCTGAT GAACGAAATG
GCCTGGTCCT ACCGCGCCAT CGGCGCCAAG GTCTGGATGC TCGATCTCGG TCGCAGTTTC
GAGAAACTGT GCCGCAAGGC CAAGGGCACC TATATCGAGT TCCGGCCCGA CGTGAATATC
TGTCTGGACC CGTTCACCCA CATCGTCGAT ATCAATGAAG ACATCGACAT GCTGGTGCCC
GGCATCGCCA AGATGTGCTC GATGCAGCAC ACCCTGGAAG AGGTCCAGTA CAAGGCCATC
TCAGCCATGG TCCTCAAGCT CTGGCGCGAA TACGGCAATG AGCTGCGCAT TACTGGCCTG
CGCGACGCCT TCAAGAGCGG CAGCATCGAA GAACTGGGTG TCGTTGGCGA CCAGCGCATC
AAGGACCTCG CCATCATGCT TAATCCCTAT TCGCGTGGCG GGCAATACGA GCGCTTCTTC
GAAGGCCGCA ACAACATTGA CTTTTCCAAT GACTTCATCG TCATCGAGAA CGAGGAACTG
AAACGCCGGC CCGACCTGCA TGCGGTGGTC AATATTCTGC TGCTGCATCG GATCACCGGC
GAGATGTACC TCACCCGTAA CCGGCGCAAG GTGCTCTTCG TCGACGAACT GAAGCAGCAG
TTGGGTGATA TCGGTGCCGA CGATCCGGTC AAGGCCGCCG TCATTGAGGA AGCGGCCCGG
CGCGCCCGCA AGTACGGCGG TGCGCTTGGC ACCGCAACCC AGAGCGCCGA CGACTTCTAC
GGCTCGACCC AGATGGAAGC AGCCTTCAAC TGCTCGGACT GGGTTTTCCT GCTGCGCCAG
AAGCCGGAGT CCATCGAAAT GCTCGACCGC AAGGGCCGGC TGACCATGGA CGAACCGAAG
AAGCGGCTGT TGAACTCCCT GCGTACCGAG GCCGGCGTCT TCTCCGAGTT GTACATCTCG
TCGCCGGTCG GCGAAGGCGT CGCCCGTAAC ATCCTCGATC CGGCCACCCA CCTGTTGTTC
TCCAACAAGT TGGAAGACAA CGCCCCGATC GACGAATTGC GCGCCCAGGG CCTATCCATC
GACGAGGCGA TCAGTGAATT ACTGCGCCAT CGGGGGCATA CGGTATGA
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| Protein sequence | MNTAHSDPHF ARQRDHAHAP RFPFGEPADT PAEQFANWLP YSGYLAAEKI FVNRDSMGVM
LELMPQSGAD ERMAEVLISL YANCPPGTGI QFHLFASPQV RSQLRQYANL RVEDEDQAEQ
AKQWGRPARN GNLFRKLARQ RVDHLLQGAQ KSLTAGFHYT IRDFRLMLSV AFPGNPEDLN
KRDELLALRD SMSSSLRSAS LPNRVCDAAD LINWCALFTN PDRISQTDAP DLNYDDGREL
RDQIVDFDTI QDPHPSGLTL WKEASPDVLE ARFYSIKSFP ERFALWQMGS LIGDLMQPAL
QYSAPFLLTL GVQVLDPNLT KSVVTANHVR ATQNAKSKMA DVMPDVNKKL QDWTAAADAI
DTGGNLVSLY HQLAIFTAPN KSVAAHEAAN AIWRGRGFQL NADAYMHRQA LLASLPMTLT
EKFHKDLVKM RRVTRKTMAN AIHMAPLIAE WRGTRTPALV FGGRRGQLMT LDIFDNDLGN
YNFAIIGAPG SGKSVLMNEM AWSYRAIGAK VWMLDLGRSF EKLCRKAKGT YIEFRPDVNI
CLDPFTHIVD INEDIDMLVP GIAKMCSMQH TLEEVQYKAI SAMVLKLWRE YGNELRITGL
RDAFKSGSIE ELGVVGDQRI KDLAIMLNPY SRGGQYERFF EGRNNIDFSN DFIVIENEEL
KRRPDLHAVV NILLLHRITG EMYLTRNRRK VLFVDELKQQ LGDIGADDPV KAAVIEEAAR
RARKYGGALG TATQSADDFY GSTQMEAAFN CSDWVFLLRQ KPESIEMLDR KGRLTMDEPK
KRLLNSLRTE AGVFSELYIS SPVGEGVARN ILDPATHLLF SNKLEDNAPI DELRAQGLSI
DEAISELLRH RGHTV
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