Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2560 |
Symbol | |
ID | 3567439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2758299 |
End bp | 2759960 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637681027 |
Product | UvrD/REP helicase |
Protein accession | YP_285763 |
Protein GI | 71908176 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.232934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCAAAG CTGATCGCTG GCAACCATCT GACGGCCTGA AACTGGAACC CAATGCGCTG GCCGCAGCAC GTGAATCCCA GCGCAGCCTG GCACTGACGG CCGGCCCCGG GGCCGGCAAG ACCGAGATGC TCGCGCAGCG TGCGGACTTT CTGCTGCGTA CCGGCATCTG TCGCTATCCG CAGCGCATCC TCGCCATCTC ATTCAAGGTC GACGCCAGTC GCAATCTCAA GGATCGAGTA CGTCGGCGCT GTGGCTTTGA ACTTGCTGCG CGTTTGGACA GCCATACTTT TCACGCATTT GCCAAACGAC TGATCGATCG TTTTCGCCCC GTGCTGACCG GTCGGAATGC GCTGGATCCG GACTACTCGA TCGGCTCACC ACGAGTCCAA GGACGTCAGA TCGACTTCGA GGACATGGTG CCCCTGGCGG TGCAAATCCT GCAGAGCAGC GAAGTGGCGC GCAATGCCGT TCGACAGACC TACAGCCATG TCTTCCTCGA CGAATTTCAG GACTGTACCG ATCCGCAATA CCAACTCATC CGAATCGCCT TTCTCGGTAC TGGCATTCCG TTGACTGCTG TCGGCGACAC CAAACAACGC ATCATGGGCT GGGCTGGCGC GCTCGAAGGC GTATTCCAGG CATTCGCCGA AGACTTTCAG GCCCTCCCCC TCAACCTTTA TCAGAACTTC CGTTCTCAGC CACGTCTGCG TCGCATGCAG AATGCGATGG TCAAAATAAT GGACCCCAAG GCTGCTGTAC CGGATAGCGA GTTGGCAGGC AAAGGCGGCT CGGTCGATGT CCTGGCATTC GCCGATAGCC AAACGGAAGC CGAGGCGCTG GCCGACCTGA TCCAAGCGTG GATCGCCGAC GAAGGCATGC CCCCCTCTGA AATCGCCGTG CTGGTGTCCA AACTCCCCGA CCTCTACGCT GACCGACTGA TGGCGGAGTT GGCGAGCCGC CACCTACCGT TCCGTAACGA ACAAAATCTG CAGGATTTGT CCGTCGAGCC GGCGGCACGG CTCATCGTCG ACTTCCTGTC CGTCGTGGCG GGCGAGCGAG AGCCGGATGC CTATGGTCGC TTGATGGACG TGCTCCTCGC CACAGGAGTG GACGAGGACA CCGCCTACGA ACTGCGAGCA CGCTGGAATC GCCATATCGA TGGCGCACGC AATCAGGTTC GCGAAGAGGG TCCCGTCGCG CACAACGCCG CAGCCTTACT CAAACTTGCT GACAGTTTCC TCGCACTTCT GGGACGGGAA GCCTTAGCAG CACTATCGGC AGACTACGAG CGAGGCAACC GTCTGGATGA AGTTATCGCA CAAACCTTGA ATCGGATCAC CGACCTTCTT GCCCTCGATA CGGATACAGC GGGGGCCCTG TCACGATTCT CGGAGGATAG CGCTGTGCGA ATTATGACCA TTCACAAAAG CAAAGGGCTG GAATTCGATA GCGTGATCAT GCTGGGCATT GAAGAACAAA CTTTCTTTGG CAAGCGTGCC GATGAGCGCT CGGCATTTTT CGTCGGAATT TCACGAGCCA AACGCCGGCT CTATCTGACC GTCGCTAATC ATCGGGAAAG GCCGGAAGGA TATCGGCGCC GTTGGGATGA AGCCCGATCT CCTCTCGTGG AGTTTCTGGA ATACGCCACG AATACGACGT AA
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Protein sequence | MIKADRWQPS DGLKLEPNAL AAARESQRSL ALTAGPGAGK TEMLAQRADF LLRTGICRYP QRILAISFKV DASRNLKDRV RRRCGFELAA RLDSHTFHAF AKRLIDRFRP VLTGRNALDP DYSIGSPRVQ GRQIDFEDMV PLAVQILQSS EVARNAVRQT YSHVFLDEFQ DCTDPQYQLI RIAFLGTGIP LTAVGDTKQR IMGWAGALEG VFQAFAEDFQ ALPLNLYQNF RSQPRLRRMQ NAMVKIMDPK AAVPDSELAG KGGSVDVLAF ADSQTEAEAL ADLIQAWIAD EGMPPSEIAV LVSKLPDLYA DRLMAELASR HLPFRNEQNL QDLSVEPAAR LIVDFLSVVA GEREPDAYGR LMDVLLATGV DEDTAYELRA RWNRHIDGAR NQVREEGPVA HNAAALLKLA DSFLALLGRE ALAALSADYE RGNRLDEVIA QTLNRITDLL ALDTDTAGAL SRFSEDSAVR IMTIHKSKGL EFDSVIMLGI EEQTFFGKRA DERSAFFVGI SRAKRRLYLT VANHRERPEG YRRRWDEARS PLVEFLEYAT NTT
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