Gene Daro_2371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2371 
Symbol 
ID3568585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2555350 
End bp2556261 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content64% 
IMG OID637680838 
ProductABC transporter related 
Protein accessionYP_285577 
Protein GI71907990 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.0363679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.535582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCATA TCGAGGGGGT CTCGTACCGC TACCGTGATG CGACGAGCCC GGCGCTGACC 
GACCTCACGC TGAATATCCC GGCCGGTGGC GTCTATGGCC TGCTCGGCCC AAACGGTGCC
GGCAAGACAA CATTGATTTC GCTGCTGGCC GGGTTGCTGA AAACGCCCAC CGGAAAAATC
TCGCTGCATG ACCAGCCTCT GGCCGATGCC CGTGCCGCCA ACCCACGCGC CATTGCCCTG
GTGCCGCAGG ATTACGCGTT CTACCCGATG CTGACCGTCG CCGAAAACCT GCGTTTCTTC
GGCGGCGTGC TCGGGCTGAG CAGTGCCGAC CTGAAGGCGC AGACCGATGC CGCCATCACC
TTCGCCCGGC TCGAGCAGGT CACGGGCAAG CGGGCTGAAC AGCTTTCCGG CGGCCTTCGC
CGGCGCCTGA ACCTGGCCAT CGGCCTGCTC GGCCAGCCGC AACTGCTGCT GCTCGACGAG
CCGACGGTCG GTGTCGACCC GCAATCTCGC CACTTCCTGC TCGACGCCAT TGCTGCCCTG
CCGGAGGCCG GCACGACGGT GATCTACACC AGCCACTACA TGGAAGAAGT CGAGGCCATC
TGCCAGCGCA TCGCCATCAT TGATCAGGGC AAACTGCTGG CCGAAGGTGC GCTGACCGAC
ATTCTGCACA GCCCCGAACC TCAGCTCGAG CTCCAACTCG ACCAAGCTTT GCCCGAGGAT
ATCGCCAAGC GCTACGCCGC CAGCCCGCTT GGCCATCTGC AATATCGCCT AAGCCTGACT
TCAACCGCTG CCTTGTCCAA GCTGCTCGAC GAACTGGCGG CGGCGAACTG CACGGTCCGT
CATCTGAACC TCGGCCAACA TGATCTGGAG CAGTTCTTCA TGCGCCTGAC CAAACGCTCG
CTGCGGGACT AA
 
Protein sequence
MLHIEGVSYR YRDATSPALT DLTLNIPAGG VYGLLGPNGA GKTTLISLLA GLLKTPTGKI 
SLHDQPLADA RAANPRAIAL VPQDYAFYPM LTVAENLRFF GGVLGLSSAD LKAQTDAAIT
FARLEQVTGK RAEQLSGGLR RRLNLAIGLL GQPQLLLLDE PTVGVDPQSR HFLLDAIAAL
PEAGTTVIYT SHYMEEVEAI CQRIAIIDQG KLLAEGALTD ILHSPEPQLE LQLDQALPED
IAKRYAASPL GHLQYRLSLT STAALSKLLD ELAAANCTVR HLNLGQHDLE QFFMRLTKRS
LRD