| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2320 |
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| Symbol | |
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| ID | 3566175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2499984 |
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| End bp | 2502551 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637680786 |
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| Product | hypothetical protein |
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| Protein accession | YP_285526 |
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| Protein GI | 71907939 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR02746] type-IV secretion system protein TraC |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.121695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG CCCACGGCGA TCCCCATTTC ATTGGTCAGC GCGACCACGC CCATGCGCCG
CGCTTTCCCT TTGGCGAGCC GGCGGACACA CCGGCTGAAC AGTTCGCCAA CTGGCTGCCC
TACTCTGGCT ATCTCGCCGC CGAGAAGATT TTCGTGAACC GCGACAGCAT GGGCGTCATG
CTCGAATTGA TGCCGCAGTC GGGCGCCGAC GAGCGGATGG CGGAAGTGCT GATTTCGCTC
TACGCCAATT GCCCGCCCGG CACCGGTATC CAGTTCCATC TGTTCGCCTC GCCGCAGGTG
CGCAGCCAGT TGCGCCAGTA CGCCAATCTG CGGGTCGAGG ATGAGGATCA GGCCGAGCAG
GCCAAACAGT GGGGCCGTCC GGCACGCAAC GGAAATCTGT TCCGCAAATT GGCCAGGCAG
CGCGTCGAGC ACCTGCTGCA GGGGGCACAG AAGTCGCTGA CCGCCGGTTT CCACTACACG
ATCCGGGATT TTCGGCTGAT GCTGAGCGTC GCCTTTCCGG GCGACCCGGA AGACCTCAAC
AAACGCGACG AACTGCTCGC CCTGCGCGAC TCGATGTCGT CCAGCCTGCG CTCAGCCTCG
CTGCCCAATC GCGTTTGTGA TGCCGCCGAC CTGATCAACT GGTGTGCGCT GTTCACCAAT
CCCGACCGCA TCTCCCAAAC CGATGCGCCG GACCTCAACT ACGATGATGG TCGAGAACTG
CGCGACCAGA TCGTCGACTT CGACACCATC CAGGACCCGC ATCCGAGTGG CCTGACCTTG
TGGAAGGAAG CCAGTCCCGA TGTATTAGAG GCGCGCTTCT ACTCGATCAA GAGTTTCCCC
GAGCGCTTTG CCCTGTGGCA GATGGGGTCG CTGATCGGCG ACCTGATGCA GCCGGCCTTG
CAGTACAGCG CACCGTTTCT GCTCACCCTC GGCGTCCAGA TTCTCGACCC CAACCTCACC
AAGTCGGTGG TCACCGCCAA CCATGTGCGG GCGACGCAAA ACGCCAAATC GAAGATGGCT
GACGTCATGC CGGACGTCAA CAAGAAGCTG CAGGACTGGA CGGCCGCGGC CGATGCCATC
GACACCGGCG GCAATCTGGT CAGCCTGTAC CACCAGTTGG CGATATTCAC CGCACCCAAC
AAATCGGTCG CCGCTCACGA AGCGGCCAAT GCGATCTGGC GCGGCCGGGG TTTCCAGCTC
AATGCCGACG CCTACATGCA CCGCCAGGCA CTGCTCGCCA GCCTGCCGAT GACGCTGACC
GAGAAGTTCC ACAAGGACTT GGTCAAAATG CGCCGGGTCA CGCGCAAGAC CATGGCCAAC
GCCATCCACA TGGCGCCGCT GATCGCCGAG TGGCGCGGCA CGCGCACCCC GGCCCTAGTG
TTTGGGGGAC GGCGGGGGCA GTTGATGACG CTCGATATCT TCGACAACGA TCTCGGCAAC
TACAACTTCG CCATCATCGG TGCCCCCGGC TCGGGCAAGT CGGTACTGAT GAACGAAATG
GCCTGGTCCT ACCGCGCCAT CGGCGCCAAG GTCTGGATGC TCGATCTTGG TCGCAGCTTC
GAGAAGCTGT GCCGCAAGGC CAAGGGCACC TATATCGAGT TCCGGCCCGA CGTGAATATC
TGCCTGGATC CGTTCACCCA CATCGTCGAC ATTAATGAAG ACATCGACAT GCTGGTACCC
GGCATTTCCA AGATGTGCTC GATGCAGCAC ACCCTGGAAG AGGTTCAGTA CAAGGCCATC
TCGGCCATGG TCCTCAAGCT CTGGCGCGAA TACGGCAACG AACTGCGCAT CACCGGGCTA
CGCGATGCCT TCAAGAGCGG GAGCATCGAA GAACTAGGCA TCGTTGGCGA CCAGCGCATC
AAGGACCTCG CCATCATGCT CAACCCCTAC TCGCGTGGCG GGCAATACGA ACGCTTCTTC
GAAGGCCAGA ACAACATCGA CTTTTCCAAT GACTTCATCG TCATCGAGAA CGAGGAACTG
AAACGCCGGC CCGACCTGCA TGCCGTCGTC AATATTCTGC TGCTCCATCG GATCACCGGC
GAGATGTACC TCACGCGCAA CCGGCGCAAG GTACTTTTCG TCGACGAGTT GAAACAGCAA
CTGGGCGACA TCGGTGCCGA CGACCCGGTC AAGGCTGCCG TGATCGAGGA AGCGGCCCGG
CGTGCCCGCA AGTACGGCGG TGCGCTCGGC ACTGCGACCC AGAGTGCCGA CGACTTCTAC
GGCTCGACCC AGATGGAAGC GGCCTTCAAC TGCTCAGACT GGGTCTTCCT GCTGCGTCAG
AAGCCCGAAT CCATCGAAAT GCTCGACCGC AAGGGCCGGC TGACCATGGA TGAACCGAAG
AAACGCCTGC TCAATTCCCT GCGCACCGAG GCCGGCGTCT TCTCCGAGTT GTACATCTCG
TCGCCGGTCG GCGAAGGCGT CGCCCGCAAC ATCCTCGATC CGGCCACCCA CCTGTTGTTC
TCCAACAAGT TGGAAGACAA CGCCCCGATC GATGAATTGC GCGCCCAGGG CCTATCCATC
GACGAGGCGA TCAGCGAACT GCTGCGCCAT CGGGGGCACG CGGTATGA
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| Protein sequence | MNTAHGDPHF IGQRDHAHAP RFPFGEPADT PAEQFANWLP YSGYLAAEKI FVNRDSMGVM
LELMPQSGAD ERMAEVLISL YANCPPGTGI QFHLFASPQV RSQLRQYANL RVEDEDQAEQ
AKQWGRPARN GNLFRKLARQ RVEHLLQGAQ KSLTAGFHYT IRDFRLMLSV AFPGDPEDLN
KRDELLALRD SMSSSLRSAS LPNRVCDAAD LINWCALFTN PDRISQTDAP DLNYDDGREL
RDQIVDFDTI QDPHPSGLTL WKEASPDVLE ARFYSIKSFP ERFALWQMGS LIGDLMQPAL
QYSAPFLLTL GVQILDPNLT KSVVTANHVR ATQNAKSKMA DVMPDVNKKL QDWTAAADAI
DTGGNLVSLY HQLAIFTAPN KSVAAHEAAN AIWRGRGFQL NADAYMHRQA LLASLPMTLT
EKFHKDLVKM RRVTRKTMAN AIHMAPLIAE WRGTRTPALV FGGRRGQLMT LDIFDNDLGN
YNFAIIGAPG SGKSVLMNEM AWSYRAIGAK VWMLDLGRSF EKLCRKAKGT YIEFRPDVNI
CLDPFTHIVD INEDIDMLVP GISKMCSMQH TLEEVQYKAI SAMVLKLWRE YGNELRITGL
RDAFKSGSIE ELGIVGDQRI KDLAIMLNPY SRGGQYERFF EGQNNIDFSN DFIVIENEEL
KRRPDLHAVV NILLLHRITG EMYLTRNRRK VLFVDELKQQ LGDIGADDPV KAAVIEEAAR
RARKYGGALG TATQSADDFY GSTQMEAAFN CSDWVFLLRQ KPESIEMLDR KGRLTMDEPK
KRLLNSLRTE AGVFSELYIS SPVGEGVARN ILDPATHLLF SNKLEDNAPI DELRAQGLSI
DEAISELLRH RGHAV
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