Gene Daro_2072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2072 
Symbol 
ID3570194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2230509 
End bp2231858 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content62% 
IMG OID637680546 
ProductSodium/hydrogen exchanger 
Protein accessionYP_285286 
Protein GI71907699 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value0.64025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTT CCGTCTGGGC GCTGATCGTC GGCGCCTTGC TGATCACCAT GGCTTTGGCC 
GGTACGCTGA TGAAGCGATT GCCGGTCAGT GCTTCGATGT TTTATCTGGC GGTCGGCTAC
GGGCTGGGCA GTGCCGGATG GGGGCTGATG GCGCCTGATC CACGGCAGGT ATCGGTCATT
CTCGAGCGGG TCGCCGAAGT GGCCTTGCTG ATTTCACTGT TTTCGGTCGG CCTGAAACTG
GGACTGCCGT TTTCCAGCCG ACACTGGCGC TTGCCCTTGC GTCTGGCTTT TGTCTCGATG
GCGCTGACCA TCGGCCTCAT TACGTTGGCC GGCATCTTCC TGCTGGGTAT GCCGCTGGGG
GCTGCGATCC TGCTCGGCGG GATTCTGGCC CCGACTGACC CGGTCCTCGC TGCGGATGTC
CAGGTCGATG AACCTAGTGA CCGTGATCGT CTGCGCTTCA GCCTGACCGG CGAGGGCGGT
TTCAACGACG GCGCCGCTTT CCCCTTCGTG ATGCTGGGCC TGGGACTGCT GGGCATGCAC
GAACTTGGCA GCTGGGGCTG GCGATGGATC GCGATCGATG TCCTCTGGGC CTTGGCCGGT
GGCTTGCTCA TCGGGAGCCT GCTGGGGGCA TTGATCGGCA AACTGGTGGT CTATCTGAGA
ACGCGCCATC AGGAAGCGGT CGGGCTGGAT GAATTTCTGG CACTTGGGCT GGTTGCCCTG
GCTTTCGGTG TGGCGCAATT GCTTCAGGCT TCGGGATTTC TCGCGGTCTT CGCCGCCGGG
CTTGCCTTGC AGCGAGTCAA GGAACGCTCG CGCCACCAGA AGGCGCCAGA CGAAGGGCCG
GCCGGTTTGC AAGGCAAGGA TGCGCACCTG GCTGTCGCCA CCCATCCCAA TCTCGCCAGC
GCCTACATGA TGCAGGCGGT ACGTGGCTTC AACGAACAAC TCGAGCGGAT CGCCGAACTG
GTGATTGTCC TTGCCGTTGG CGCCATGCTG GCCTATGTCC GGATCGATGC ATGGGCAATT
GCCTTCCTTG CCCTCCTGTT TTTCGTCCTG CGCCCGGTGT CGGTCTGGCT GGGATTGCTT
GGCGCCTCAG TGTCCGGTGA TCAGCGTTTC CTGATTGCCT GGTTCGGCAT CCGCGGTATT
GGCTCTGTCT ATTACCTGAT GTTCGCCCTG AATCATGGCC TCTCAGGTTC GCTGGCCGAT
CAGGCGATCA ATATCACCCT GCTGGCGGTG GCTGCTTCCA TCATCCTGCA CGGGGTTTCG
GTGACCCCTT TGATGGCGCT CTATGGCAGG CGGCAGGCCG GCAGGAGCAG GCGTTCGCTA
TCAGAGAACC GTCGCCACGA CATTCGCTGA
 
Protein sequence
MSFSVWALIV GALLITMALA GTLMKRLPVS ASMFYLAVGY GLGSAGWGLM APDPRQVSVI 
LERVAEVALL ISLFSVGLKL GLPFSSRHWR LPLRLAFVSM ALTIGLITLA GIFLLGMPLG
AAILLGGILA PTDPVLAADV QVDEPSDRDR LRFSLTGEGG FNDGAAFPFV MLGLGLLGMH
ELGSWGWRWI AIDVLWALAG GLLIGSLLGA LIGKLVVYLR TRHQEAVGLD EFLALGLVAL
AFGVAQLLQA SGFLAVFAAG LALQRVKERS RHQKAPDEGP AGLQGKDAHL AVATHPNLAS
AYMMQAVRGF NEQLERIAEL VIVLAVGAML AYVRIDAWAI AFLALLFFVL RPVSVWLGLL
GASVSGDQRF LIAWFGIRGI GSVYYLMFAL NHGLSGSLAD QAINITLLAV AASIILHGVS
VTPLMALYGR RQAGRSRRSL SENRRHDIR