Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2023 |
Symbol | |
ID | 3566970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2176253 |
End bp | 2176696 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637680494 |
Product | positive regulator of sigma(E), RseC/MucC |
Protein accession | YP_285238 |
Protein GI | 71907651 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3086] Positive regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 0.00574884 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTAAGCA TGAGTGATGA ACAGACAACG ATCCGGGCCG TAGTTCGTGC TCGAGAGGGG GCAAGCGCCC TTGTTGAAGT AGAGCAGGGT GGCTGTGGGC GGTGTCATGA AAAAGGCGGC TGTGGCGGCC AGCACCTAAC CCAGATGTTT TGTGCCGGGC CAAAAACTTA TCAGGTAGAC AACGCAATCG GCGCGGATAT TGGTGATCAC GTGACGATCG CAGTTGCTGC CGGTAGCGTT CGCCATACAG CTAATCTGGC TTACGGGGTT CCGCTGATCG GCTGCATCGG TGGAGCTGTC ATCGGGGCTT CATTTGCCGG TGACGGCGGT GCCGTGCTTG GTGCGGCAAG TGGCTTGATT CTGTCTTTTT TGTACATTCG TTTTCGCTCG CAAGCCAATG CTGGAAACTC GACTGAACGC CCTCATATAA TTTCCCGTTC CTGA
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Protein sequence | MVSMSDEQTT IRAVVRAREG ASALVEVEQG GCGRCHEKGG CGGQHLTQMF CAGPKTYQVD NAIGADIGDH VTIAVAAGSV RHTANLAYGV PLIGCIGGAV IGASFAGDGG AVLGAASGLI LSFLYIRFRS QANAGNSTER PHIISRS
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