| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1998 |
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| Symbol | |
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| ID | 3567713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2150308 |
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| End bp | 2152149 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637680469 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_285214 |
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| Protein GI | 71907627 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 0.472185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTC GTCCGATCCG TAACATCGCC ATCATCGCCC ACGTTGACCA CGGTAAAACC
ACCCTGGTCG ACCAGCTGCT CCGCCAGTCC GGTACTTTTG CTGCTCACCA ACAATTGGTT
GAGTGCGTTA TGGACTCCAA TGACCTGGAA AAAGAGCGTG GCATCACGAT CCTTTCCAAG
AACACTGCGG TCGAGTATCA GGGCGTCCAC ATCAACATCG TTGATACCCC GGGACACGCG
GACTTCGGTG GTGAAGTCGA GCGCGTGCTG GGTATGGTTG ATGGTGTGGT CCTGCTGGTC
GATGCTGCCG AAGGCCCGAT GCCGCAAACC CGTTTCGTGA CCAAGAAGGC GCTGGCCCTC
GGCCTGCGCC CGATCGTTCT GGTCAACAAG GTTGACCGCG ATGGCGCCGA TCCCGATCAG
GCCGTCAATC TGACCTTCGA CCTGTTCGAC AAGCTGGGCG CGACCGACGA GCAACTCGAT
TTCCCGATCG TTTACGCATC CGGCCTCAAT GGCTGGGCTG CCATGGAGCT GGATCAGCCG
CGCGAAAACA TGATTCCGCT GTTCGACACG ATTCTGCGCC ACGTGCCCGC CCCGGATACC
GATATCGAAG CACCGCTGCA ACTGCAGATT ACTGCGCTTG ATTACTCTTC CTACGTCGGT
CGTATCGGCG TTGGCAAGAT CAATCGCGGC AAGGTCAAGA CCGGTCAGAA CGTGCTGGTC
ATGTTCGGTA CCGAAGAAGA AGCGGCCGAA CACGAGCGCA CCCCGATCAA GGCCAAGATT
GGCCAGGTTT TCGGCTACAA GGGCCTGAAC AAGGTTGAGC TGGAAGAAGG TCATGCTGGC
GACATCGTCC AGATTACCGG CATCGAAGAC CTGGTGCTCG GCTGCACCGT AACCGATCCG
GAGCAACCGG AATCCCTGCC GCTGCTGAAG ATCGACGAGC CGACGTTGTC CATGCAGTTC
ATGGTCAACA CCAGCCCGCT GGCTGGTACC GAAGGCAAGT TCGTGACTAG CCGTCAGATC
CGCGATCGTC TGCACAAGGA ACTGCTGACC AATATGGCCC TGCGCGTTCA TGACACCGGT
AATGGCGACG TGTTCGACGT TTCAGGTCGT GGCGAACTGC ACCTCGGCAT CCTGCTCGAG
AACATGCGTC GCGAAGGCTA CGAGCTGGCC GTCGGCCGTC CGCGCGTCGT CAAGAAGACC
ATCAATGGTG TCGAGTGCGA GCCGTATGAG TTGCTGACCG TTGACGTCGA AGAAGACACC
CAGGGCGGTG TCATGGAAAG CCTTGGCCAG CGCAAGGGCG ACCTGACGGA CATGGTGCCA
GACGGCCGCG GTCGCGTCCG TATCGAATAC CGCATTCCGG CCCGTGGTCT GATCGGCTTC
CAGGGCGAGT TCATGAACTT GACCCGTGGT AACGGCCTGA TGAGCCACGT TTTCGACGAA
TATGCCCCGG TCAAGGATGG CAGCGTTGCC GAGCGTCGCA ACGGCGTACT GATCTCCCAG
GACAATGGCG AAGCTGTTGC CTATGCACTG TGGAAGCTGC AGGATCGCGG CCGCATGTTC
GTTGTGCCGG GCGACAAGCT GTACGAAGGC ATGATCATCG GTATCCACAG CCGTGAAAAC
GACCTCGTGG TTAACCCGAT CAAGGGCAAG CAGCTGACCA ACGTTCGCGC CTCCGGTACG
GACGAAGCTG TTCGCCTGGT GCCGGCCGTC CAGCTTAGCC TGGAAGCCGC TGTCGAGTTT
ATCGAGGAAG ACGAACTGGT CGAGCTGACG CCGAAGTCGA TTCGTTTGCG CAAGCGTTAT
CTGACCGAGA TTGAGCGCAA GCGCGCGGTT CGCGGCCTGT AA
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| Protein sequence | MSARPIRNIA IIAHVDHGKT TLVDQLLRQS GTFAAHQQLV ECVMDSNDLE KERGITILSK
NTAVEYQGVH INIVDTPGHA DFGGEVERVL GMVDGVVLLV DAAEGPMPQT RFVTKKALAL
GLRPIVLVNK VDRDGADPDQ AVNLTFDLFD KLGATDEQLD FPIVYASGLN GWAAMELDQP
RENMIPLFDT ILRHVPAPDT DIEAPLQLQI TALDYSSYVG RIGVGKINRG KVKTGQNVLV
MFGTEEEAAE HERTPIKAKI GQVFGYKGLN KVELEEGHAG DIVQITGIED LVLGCTVTDP
EQPESLPLLK IDEPTLSMQF MVNTSPLAGT EGKFVTSRQI RDRLHKELLT NMALRVHDTG
NGDVFDVSGR GELHLGILLE NMRREGYELA VGRPRVVKKT INGVECEPYE LLTVDVEEDT
QGGVMESLGQ RKGDLTDMVP DGRGRVRIEY RIPARGLIGF QGEFMNLTRG NGLMSHVFDE
YAPVKDGSVA ERRNGVLISQ DNGEAVAYAL WKLQDRGRMF VVPGDKLYEG MIIGIHSREN
DLVVNPIKGK QLTNVRASGT DEAVRLVPAV QLSLEAAVEF IEEDELVELT PKSIRLRKRY
LTEIERKRAV RGL
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