| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1854 |
|---|
| Symbol | |
|---|
| ID | 3570102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1993479 |
|---|
| End bp | 1994801 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637680325 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_285070 |
|---|
| Protein GI | 71907483 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.13717 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATGA ACACCCTGGA AGCGCTGCGC GCCGGCAAGC TGGCCGGCAG CCGTCGCCTG
AAACTGGCCT GTGGCCTGAG CGAGTTCCCT CGCGAGATTT TCGCTCTGGC GGATACGCTG
GAGATTCTCG ATTTATCAGG GAATGCACTG TCCACGCTGC CCGACGATCT GCCCCGGCTG
CAGAAGATGC GCATTCTTTT TTGTTCGGAC AACCATTTCA CGGAATTGCC GGCCGTGATC
GGCCAATGCG CCCAGCTGGA AATGGTCGGC TTCAAGGCGA ACCGGATTCG GCAGGTGCCG
GCGGCAGCAT TGCCGCCCAA GTTACGCTGG CTGATCCTGA CCGATAACCG GATTGCCGAA
CTGCCGCCGG AAATCGGTCA CTGCTCGCGC TTGCAGAAGC TGATGCTGGC CGGCAACCAG
TTGCGCACAC TGCCGGGCGA GATGGCCAAT TGCACCCGGC TGGAGCTGGT ACGCATCGCG
GCCAATCGCC TGACAGCCTT GCCGGAATGG CTATTGTCCT TGCCACGACT TTCCTGGCTG
GCCTTTGCCG GCAATCCGTT TTGTCAGGAG GTACCGGTTC AAGTGGGGGG GGCGCCCATT
CACTGGGACG ATCTGCACGT CAGCCATCAA CTGGGCGAGG GCGCTTCAGG CGTCATTCAT
CAGGCCGAAT GGCGTTCGGC CGGTAAAGCG CAACCGGTGG CGCTCAAACT GTTCAAGGGC
GTGGTGACGA GCGATGGCTT GCCGCTGAAT GAGATGAACG CCTGCATCTC CGCCGGTACG
CACCCGCATC TGATTTCGGT ACTCGGCAAG CTGGCGGCCC ACCCGGAAGA TGCCCACGGG
CTGGTCATGG CGCTGATCGA CAGCAGCTTC CGCAACCTGG CCGGGCCGCC CAGTCTGGAT
TCCTGCACGC GCGATGTTTA TCCGGCAGCC TTGAGCTTCG ATCTCGATGC GGCCATTCAA
ATCGCGCTCG GCATCGCCTC GGCGGCCGAA CACCTGCACG CGCAGGGCAT CATGCATGGC
GATCTCTATG GCCACAATAT CCTGCATGGT GCCCATGGGC GGGCCATCCT CGGCGACTTT
GGCGCGGCGT CGTTCGTGCC GCCGGATGAT CCGCTCGTTG CCAAGGCCCT GCAACGCATC
GAGGTGCGGG CGTTTTCCTG TTTGCTGGAG GAGTTGCTGG AGCGGATTGG ACCTGCCGCG
CTCAACCCGG AAAAAGTCGA AAAACTGAAA TCCCTGCTGG CCGACTGCGC CCAGGAAAAC
GTCTCGGCTC GCCCGCTGTT CGCCGAGATC GTTTCGCGGC TCGGTGCCTT AAAACTGGCC
TGA
|
|---|
| Protein sequence | MPMNTLEALR AGKLAGSRRL KLACGLSEFP REIFALADTL EILDLSGNAL STLPDDLPRL
QKMRILFCSD NHFTELPAVI GQCAQLEMVG FKANRIRQVP AAALPPKLRW LILTDNRIAE
LPPEIGHCSR LQKLMLAGNQ LRTLPGEMAN CTRLELVRIA ANRLTALPEW LLSLPRLSWL
AFAGNPFCQE VPVQVGGAPI HWDDLHVSHQ LGEGASGVIH QAEWRSAGKA QPVALKLFKG
VVTSDGLPLN EMNACISAGT HPHLISVLGK LAAHPEDAHG LVMALIDSSF RNLAGPPSLD
SCTRDVYPAA LSFDLDAAIQ IALGIASAAE HLHAQGIMHG DLYGHNILHG AHGRAILGDF
GAASFVPPDD PLVAKALQRI EVRAFSCLLE ELLERIGPAA LNPEKVEKLK SLLADCAQEN
VSARPLFAEI VSRLGALKLA
|
|---|
| |